Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS28945

Experiment: R2A with Sisomicin 0.035 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Sisomicin 0.035 mg/ml
1,851,618	+		RR42_RS28940	0.46	+0.9
1,851,618	+		RR42_RS28940	0.46	+0.9
1,851,618	+		RR42_RS28940	0.46	-0.3
1,851,618	+		RR42_RS28940	0.46	+0.3
1,851,619	-		RR42_RS28940	0.46	+0.8
1,851,619	-		RR42_RS28940	0.46	-0.3
1,851,620	+		RR42_RS28940	0.46	-1.1
1,851,620	+		RR42_RS28940	0.46	+0.6
1,851,621	-		RR42_RS28940	0.46	+1.0
1,851,685	-		RR42_RS28940	0.52	+1.9
1,851,720	+		RR42_RS28940	0.55	+0.5
1,851,762	+		RR42_RS28940	0.58	+0.2
1,851,762	+		RR42_RS28940	0.58	-0.7
1,852,020	-		RR42_RS28940	0.79	-1.1
1,852,316	+				-0.2
1,852,349	+				+0.1
1,852,451	+		RR42_RS28945	0.12	-0.9
1,852,451	+		RR42_RS28945	0.12	+0.5
1,852,451	+		RR42_RS28945	0.12	-1.2
1,852,451	+		RR42_RS28945	0.12	+0.5
1,852,451	+		RR42_RS28945	0.12	-0.7
1,852,452	-		RR42_RS28945	0.13	+0.4
1,852,452	-		RR42_RS28945	0.13	-0.1
1,852,452	-		RR42_RS28945	0.13	+0.1
1,852,452	-		RR42_RS28945	0.13	-0.8
1,852,452	-		RR42_RS28945	0.13	+0.9
1,852,452	-		RR42_RS28945	0.13	+0.4
1,852,474	-		RR42_RS28945	0.15	+0.1
1,852,481	+		RR42_RS28945	0.16	+0.0
1,852,482	-		RR42_RS28945	0.16	+2.0
1,852,490	-		RR42_RS28945	0.17	-0.4
1,852,636	+		RR42_RS28945	0.35	-1.0
1,852,637	-		RR42_RS28945	0.35	+0.5
1,852,652	+		RR42_RS28945	0.37	-0.4
1,852,937	+		RR42_RS28945	0.71	-1.2
1,852,938	-		RR42_RS28945	0.71	+0.3
1,852,946	-				-0.7
1,852,965	+		RR42_RS28945	0.74	-0.6
1,852,998	-		RR42_RS28945	0.78	-0.5
1,853,132	+				+0.1
1,853,132	+				-0.9
1,853,132	+				+0.1
1,853,132	+				-2.1
1,853,132	+				-0.7
1,853,132	+				+1.1
1,853,132	+				-0.0
1,853,133	-				+0.9
1,853,133	-				-0.4
1,853,133	-				+0.3
1,853,133	-				+0.9
1,853,133	-				-0.2
1,853,133	-				-1.4
1,853,133	-				-0.2
1,853,133	-				+0.0
1,853,133	-				-0.4
1,853,133	-				+0.6
1,853,153	+				-0.1
1,853,154	-				+0.5
1,853,169	+				+0.2
1,853,169	+				-1.0
1,853,169	+				+0.2
1,853,169	+				+0.3
1,853,169	+				-0.9
1,853,169	+				-1.0
1,853,169	+				-0.7
1,853,169	+				-0.9
1,853,170	-				+0.2
1,853,170	-				-0.3
1,853,170	-				+0.7
1,853,170	-				+0.1
1,853,207	+				+0.6
1,853,207	+				-1.0
1,853,207	+				+0.1
1,853,207	+				+0.1
1,853,208	-				+0.7
1,853,208	-				-0.8
1,853,280	+				+0.5
1,853,280	+				+1.1
1,853,414	-				-0.1
1,853,476	+				-0.0
1,853,476	+				+1.2
1,853,477	-				-1.6
1,853,547	+		RR42_RS28950	0.11	-0.9
1,853,738	-		RR42_RS28950	0.27	-1.3
1,853,842	+		RR42_RS28950	0.36	-1.2
1,853,842	+		RR42_RS28950	0.36	+0.7
1,853,843	-		RR42_RS28950	0.36	-1.2
1,853,843	-		RR42_RS28950	0.36	+0.2