Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS28805

Experiment: R2A with Sisomicin 0.035 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Sisomicin 0.035 mg/ml
1,813,675	-		RR42_RS28800	0.68	+0.6
1,813,675	-		RR42_RS28800	0.68	-0.9
1,813,675	-		RR42_RS28800	0.68	+0.7
1,813,806	+		RR42_RS28800	0.74	+0.0
1,813,893	+		RR42_RS28800	0.78	-0.2
1,813,893	+		RR42_RS28800	0.78	+0.6
1,813,894	-		RR42_RS28800	0.78	-0.2
1,813,894	-		RR42_RS28800	0.78	+1.9
1,813,894	-		RR42_RS28800	0.78	-0.1
1,814,145	+		RR42_RS28800	0.89	-0.7
1,814,157	+		RR42_RS28800	0.90	-1.2
1,814,157	+		RR42_RS28800	0.90	+0.7
1,814,307	+				+0.7
1,814,307	+				-0.5
1,814,307	+				+0.4
1,814,307	+				-0.7
1,814,307	+				+1.6
1,814,307	+				+0.1
1,814,308	-				-0.7
1,814,308	-				-0.5
1,814,388	+				-1.1
1,814,495	-				+0.2
1,814,549	+				-1.0
1,814,557	+				+1.0
1,814,557	+				+0.1
1,814,557	+				-1.3
1,814,846	+		RR42_RS28805	0.34	-1.1
1,814,931	-		RR42_RS28805	0.42	+0.8
1,814,931	-		RR42_RS28805	0.42	+0.9
1,815,017	+		RR42_RS28805	0.51	-0.7
1,815,017	+		RR42_RS28805	0.51	-0.2
1,815,104	-		RR42_RS28805	0.59	-0.3
1,815,104	-		RR42_RS28805	0.59	-0.8
1,815,221	+		RR42_RS28805	0.71	-0.1
1,815,221	+		RR42_RS28805	0.71	+1.5
1,815,222	-		RR42_RS28805	0.71	-0.3
1,815,222	-		RR42_RS28805	0.71	-0.8
1,815,293	-		RR42_RS28805	0.78	-1.6
1,815,324	+		RR42_RS28805	0.81	-0.1
1,815,564	-				-1.6
1,815,575	-				-0.9
1,815,575	-				-0.2
1,815,579	-				-0.2
1,815,606	+				-0.7
1,815,607	-				-0.1
1,815,607	-				+0.0
1,815,639	-				+1.3
1,815,639	-				-0.2
1,815,639	-				+0.3
1,815,691	+				+0.9
1,815,695	+				+0.2
1,815,696	-				+0.4
1,815,709	+				+0.4
1,815,712	-				-0.4
1,815,758	+				-1.1
1,815,795	+				-0.1
1,815,795	+				+1.1
1,815,796	-				-0.0
1,815,796	-				-0.4
1,815,956	+		RR42_RS28810	0.36	-1.9
1,815,957	-		RR42_RS28810	0.36	-1.9
1,816,233	-				-0.0
1,816,259	+				-0.4
1,816,259	+				-1.7
1,816,260	-				-1.3
1,816,260	-				-0.3
1,816,260	-				-0.5
1,816,324	-				-0.9