Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS28625

Experiment: R2A with Sisomicin 0.035 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Sisomicin 0.035 mg/ml
1,777,302	+				+0.1
1,777,302	+				-0.3
1,777,302	+				+0.3
1,777,302	+				+0.3
1,777,303	-				-0.1
1,777,303	-				-0.1
1,777,303	-				-0.6
1,777,665	+		RR42_RS28620	0.44	-0.6
1,777,792	-		RR42_RS28620	0.59	-0.1
1,778,049	-				+0.2
1,778,049	-				-1.6
1,778,110	+				-0.2
1,778,231	+		RR42_RS28625	0.10	-0.4
1,778,273	+		RR42_RS28625	0.14	+2.8
1,778,273	+		RR42_RS28625	0.14	+0.1
1,778,441	+		RR42_RS28625	0.31	-0.1
1,778,441	+				+0.9
1,778,442	-		RR42_RS28625	0.31	-0.1
1,778,442	-		RR42_RS28625	0.31	-0.2
1,778,741	+		RR42_RS28625	0.60	+1.7
1,778,848	+		RR42_RS28625	0.70	-0.7
1,778,849	-		RR42_RS28625	0.70	-0.3
1,778,890	+		RR42_RS28625	0.74	+0.6
1,778,891	-		RR42_RS28625	0.74	-0.6
1,779,159	+				-1.8
1,779,159	+				+0.2
1,779,159	+				-0.1
1,779,159	+				+0.6
1,779,160	-				+0.9
1,779,480	+		RR42_RS28630	0.33	+0.3
1,779,481	-		RR42_RS28630	0.33	-0.2
1,779,481	-		RR42_RS28630	0.33	+0.7
1,779,537	+		RR42_RS28630	0.38	-0.3
1,779,538	-		RR42_RS28630	0.38	-0.1
1,779,832	+		RR42_RS28630	0.66	-0.6
1,779,832	+		RR42_RS28630	0.66	-0.1
1,779,832	+		RR42_RS28630	0.66	+1.2
1,780,109	+				-0.1