Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS27775

Experiment: R2A with Sisomicin 0.035 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Sisomicin 0.035 mg/ml
1,592,444	-		RR42_RS27765	0.71	-0.2
1,592,860	+		RR42_RS27770	0.19	-0.3
1,592,861	-		RR42_RS27770	0.19	-0.4
1,592,861	-		RR42_RS27770	0.19	+0.0
1,593,263	-		RR42_RS27770	0.83	-0.5
1,593,559	+				-0.1
1,593,646	+		RR42_RS27775	0.11	-0.1
1,593,762	-		RR42_RS27775	0.16	-0.3
1,593,767	+		RR42_RS27775	0.17	+0.5
1,593,897	-		RR42_RS27775	0.22	-1.2
1,593,898	+		RR42_RS27775	0.22	-0.7
1,593,898	+		RR42_RS27775	0.22	+1.2
1,593,935	-		RR42_RS27775	0.24	-0.1
1,593,985	-		RR42_RS27775	0.26	+0.0
1,594,103	+		RR42_RS27775	0.32	+0.3
1,594,295	+		RR42_RS27775	0.40	-0.3
1,594,296	-		RR42_RS27775	0.41	-0.6
1,594,296	-		RR42_RS27775	0.41	-0.1
1,594,296	-		RR42_RS27775	0.41	+0.1
1,594,296	-		RR42_RS27775	0.41	-0.6
1,594,394	-		RR42_RS27775	0.45	+1.4
1,594,439	-		RR42_RS27775	0.47	-0.4
1,594,510	+		RR42_RS27775	0.50	-1.2
1,594,610	+		RR42_RS27775	0.55	-1.2
1,594,610	+		RR42_RS27775	0.55	-0.4
1,594,611	-		RR42_RS27775	0.55	+0.7
1,594,611	-		RR42_RS27775	0.55	+1.4
1,594,637	-		RR42_RS27775	0.56	-0.5
1,594,879	+		RR42_RS27775	0.67	+0.1
1,594,879	+		RR42_RS27775	0.67	-0.6
1,594,880	-		RR42_RS27775	0.67	-0.2
1,594,880	-		RR42_RS27775	0.67	+0.3
1,594,880	-		RR42_RS27775	0.67	+0.9
1,594,922	-		RR42_RS27775	0.69	+0.8
1,594,972	+		RR42_RS27775	0.71	-0.4
1,594,972	+		RR42_RS27775	0.71	+0.6
1,594,972	+		RR42_RS27775	0.71	+0.3
1,594,973	-		RR42_RS27775	0.71	-0.6
1,594,973	-		RR42_RS27775	0.71	-0.4
1,594,973	-		RR42_RS27775	0.71	-0.4
1,595,077	+		RR42_RS27775	0.76	-0.1
1,595,078	-		RR42_RS27775	0.76	+0.9
1,595,093	+		RR42_RS27775	0.77	-1.5
1,595,143	+		RR42_RS27775	0.79	-0.8
1,595,462	+				-1.6
1,595,591	+				+0.1
1,595,591	+				+0.6
1,595,591	+				-0.3
1,595,592	-				+0.3
1,595,673	-				-0.1
1,595,692	-				+0.8
1,595,692	-				+1.5
1,595,692	-				+0.3
1,595,741	+				+0.8
1,595,742	-				-0.6
1,595,851	+				-1.4
1,595,867	+				+1.2
1,595,867	+				-0.7
1,595,867	+				-1.0
1,595,867	+				-0.8
1,595,867	+				-1.1
1,595,868	-				+0.8
1,595,868	-				-2.2
1,595,868	-				+0.0
1,596,095	+		RR42_RS27780	0.24	-1.1
1,596,095	+		RR42_RS27780	0.24	+0.5
1,596,095	+		RR42_RS27780	0.24	+0.4
1,596,096	-		RR42_RS27780	0.25	-0.6
1,596,098	+		RR42_RS27780	0.25	+0.4
1,596,167	+		RR42_RS27780	0.29	-0.4
1,596,167	+		RR42_RS27780	0.29	-1.4
1,596,167	+		RR42_RS27780	0.29	-0.4
1,596,168	-		RR42_RS27780	0.29	-0.1
1,596,350	+		RR42_RS27780	0.42	+3.3