Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS25750

Experiment: R2A with Sisomicin 0.035 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Sisomicin 0.035 mg/ml
1,116,837	-		RR42_RS25740	0.50	+0.2
1,116,848	+		RR42_RS25740	0.52	-0.0
1,116,849	-		RR42_RS25740	0.52	-1.1
1,116,849	-		RR42_RS25740	0.52	-0.3
1,117,235	-				-0.2
1,117,283	+				-0.0
1,117,390	+				-0.2
1,117,479	-				-0.2
1,117,483	+				-0.0
1,117,483	+				-1.7
1,117,634	+				-2.2
1,117,634	+				+0.1
1,117,635	-				+1.7
1,117,635	-				-0.2
1,117,635	-				+0.0
1,117,753	+				+0.5
1,117,753	+				-0.0
1,117,753	+				-0.6
1,117,753	+				+0.1
1,117,754	-				-0.6
1,117,754	-				-0.6
1,117,754	-				+1.5
1,118,022	+		RR42_RS25750	0.35	-0.1
1,118,022	+		RR42_RS25750	0.35	-0.7
1,118,023	-		RR42_RS25750	0.35	-0.5
1,118,157	+		RR42_RS25750	0.51	+0.2
1,118,157	+		RR42_RS25750	0.51	-0.6
1,118,157	+		RR42_RS25750	0.51	+1.4
1,118,158	-		RR42_RS25750	0.51	-0.0
1,118,286	+		RR42_RS25750	0.67	-0.6
1,118,287	-		RR42_RS25750	0.67	-0.7
1,118,298	+		RR42_RS25750	0.68	+0.3
1,118,304	+		RR42_RS25750	0.69	-0.4
1,118,304	+		RR42_RS25750	0.69	-1.6
1,118,305	-		RR42_RS25750	0.69	+0.1
1,118,319	+		RR42_RS25750	0.71	+0.1
1,118,322	+		RR42_RS25750	0.71	-0.9
1,118,323	-		RR42_RS25750	0.71	-0.0
1,118,323	-		RR42_RS25750	0.71	-0.3
1,118,323	-		RR42_RS25750	0.71	+0.4
1,118,328	+		RR42_RS25750	0.72	+0.5
1,118,328	+		RR42_RS25750	0.72	-0.3
1,118,328	+		RR42_RS25750	0.72	-0.5
1,118,329	-		RR42_RS25750	0.72	-0.5
1,118,329	-		RR42_RS25750	0.72	+0.1
1,118,473	-		RR42_RS25750	0.90	+2.4
1,118,852	-		RR42_RS25755	0.31	-1.5
1,118,991	-		RR42_RS25755	0.48	-0.3
1,119,031	+		RR42_RS25755	0.52	-3.0
1,119,064	+		RR42_RS25755	0.56	-1.2
1,119,501	+				+0.4
1,119,502	-				-0.7
1,119,502	-				-0.0
1,119,517	+				-1.4
1,119,518	-				-1.7
1,119,518	-				+0.2
1,119,518	-				+0.7
1,119,518	-				+0.3
1,119,523	+				+0.1
1,119,523	+				-1.3
1,119,524	-				+0.0