Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS25270

Experiment: R2A with Sisomicin 0.035 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Sisomicin 0.035 mg/ml
1,008,122	-				-0.2
1,008,951	+				+0.4
1,009,470	-		RR42_RS25270	0.34	-0.6
1,009,523	+		RR42_RS25270	0.38	-0.2
1,009,524	-		RR42_RS25270	0.38	-1.0
1,009,524	-		RR42_RS25270	0.38	+0.2
1,009,524	-		RR42_RS25270	0.38	-0.0
1,009,524	-		RR42_RS25270	0.38	+0.1
1,009,524	-		RR42_RS25270	0.38	+0.2
1,009,589	+		RR42_RS25270	0.43	+0.3
1,009,590	-		RR42_RS25270	0.43	-0.3
1,009,590	-		RR42_RS25270	0.43	-2.3
1,009,793	+		RR42_RS25270	0.58	-1.2
1,009,793	+		RR42_RS25270	0.58	-0.4
1,009,793	+		RR42_RS25270	0.58	+0.4
1,009,817	+		RR42_RS25270	0.60	+2.2
1,009,862	+		RR42_RS25270	0.64	+1.2
1,009,863	-		RR42_RS25270	0.64	-0.6
1,010,096	+		RR42_RS25270	0.81	-0.7
1,010,381	+				-0.7
1,010,381	+				-0.6
1,010,382	-				-0.0
1,010,382	-				+0.1
1,010,382	-				-2.5
1,010,485	-				-1.0
1,010,593	+				+0.1
1,010,834	+		RR42_RS25275	0.27	+0.3
1,010,835	-		RR42_RS25275	0.27	+0.3
1,010,835	-		RR42_RS25275	0.27	-0.2
1,010,836	+		RR42_RS25275	0.27	+0.2
1,010,836	+		RR42_RS25275	0.27	-0.5
1,010,875	-		RR42_RS25275	0.31	-0.6
1,010,910	+		RR42_RS25275	0.35	-0.3
1,010,910	+		RR42_RS25275	0.35	-1.3
1,010,911	-		RR42_RS25275	0.35	+1.2
1,010,911	-		RR42_RS25275	0.35	-0.2
1,010,911	-		RR42_RS25275	0.35	-0.2
1,010,911	-		RR42_RS25275	0.35	-0.5
1,010,911	-		RR42_RS25275	0.35	+0.2
1,010,911	-		RR42_RS25275	0.35	-0.6
1,010,911	-		RR42_RS25275	0.35	-0.4
1,010,912	+		RR42_RS25275	0.35	+0.2
1,010,912	+		RR42_RS25275	0.35	-0.8
1,010,913	-		RR42_RS25275	0.35	-0.2
1,011,051	+		RR42_RS25275	0.50	-1.2
1,011,052	-		RR42_RS25275	0.51	+0.3
1,011,052	-		RR42_RS25275	0.51	-0.1
1,011,052	-		RR42_RS25275	0.51	+0.7
1,011,052	-		RR42_RS25275	0.51	+0.1
1,011,162	+		RR42_RS25275	0.63	+0.6
1,011,162	+		RR42_RS25275	0.63	+0.1
1,011,163	-		RR42_RS25275	0.63	+0.3
1,011,163	-		RR42_RS25275	0.63	+1.2
1,011,163	-		RR42_RS25275	0.63	+1.3
1,011,163	-		RR42_RS25275	0.63	+0.3
1,011,163	-		RR42_RS25275	0.63	-1.1
1,011,213	+		RR42_RS25275	0.68	+1.2
1,011,214	-		RR42_RS25275	0.68	-0.2
1,011,214	-		RR42_RS25275	0.68	-0.2
1,011,225	+		RR42_RS25275	0.70	-0.3
1,011,298	-		RR42_RS25275	0.78	+1.0