Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS21250

Experiment: R2A with Sisomicin 0.035 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Sisomicin 0.035 mg/ml
92,904	+		RR42_RS21245	0.58	+0.3
92,904	+		RR42_RS21245	0.58	+0.1
93,102	-		RR42_RS21245	0.82	+1.0
93,102	-		RR42_RS21245	0.82	+0.2
93,102	-		RR42_RS21245	0.82	+0.7
93,102	-		RR42_RS21245	0.82	-0.1
93,137	-		RR42_RS21245	0.86	+0.7
93,138	+		RR42_RS21245	0.86	-1.0
93,138	+		RR42_RS21245	0.86	-0.9
93,138	+		RR42_RS21245	0.86	+0.8
93,139	-		RR42_RS21245	0.86	+0.2
93,139	-		RR42_RS21245	0.86	+1.1
93,139	-		RR42_RS21245	0.86	+0.7
93,249	+				-0.1
93,250	-				-1.0
93,250	-				-0.0
93,250	-				-0.7
93,324	-				+0.1
93,350	+				+1.2
93,396	-				-1.0
93,431	+				-1.6
93,431	+				-1.7
93,431	+				-0.3
93,431	+				+0.5
93,431	+				+0.2
93,432	-				+0.4
93,432	-				+0.1
93,432	-				-2.0
93,891	-				+1.4
93,925	+				+0.2
93,926	+				+0.1
93,969	+				-0.3
93,970	-				-0.5
94,142	+				-0.5
94,142	+				-0.2
94,143	-				-1.0
94,143	-				+0.2
94,143	-				-0.2
94,143	-				-0.6
94,301	+		RR42_RS21255	0.26	+0.1
94,340	+		RR42_RS21255	0.31	+2.1
94,340	+		RR42_RS21255	0.31	-0.5
94,341	-		RR42_RS21255	0.31	-1.6
94,344	-		RR42_RS21255	0.31	-0.3
94,471	+		RR42_RS21255	0.46	+0.6
94,640	+		RR42_RS21255	0.65	-0.9
94,641	-		RR42_RS21255	0.65	+0.7