Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS18210

Experiment: R2A with Sisomicin 0.035 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Sisomicin 0.035 mg/ml
3,944,404	+		RR42_RS18205	0.29	-0.3
3,944,405	-		RR42_RS18205	0.29	-0.0
3,944,435	+		RR42_RS18205	0.33	+0.6
3,944,435	+		RR42_RS18205	0.33	+0.5
3,944,435	+		RR42_RS18205	0.33	-0.9
3,944,436	-		RR42_RS18205	0.33	-0.1
3,944,436	-		RR42_RS18205	0.33	-0.9
3,944,440	-		RR42_RS18205	0.33	-1.0
3,944,440	-		RR42_RS18205	0.33	-0.0
3,944,576	+		RR42_RS18205	0.47	+0.2
3,944,576	+		RR42_RS18205	0.47	-0.6
3,944,576	+		RR42_RS18205	0.47	-0.3
3,944,577	-		RR42_RS18205	0.47	-1.9
3,944,577	-		RR42_RS18205	0.47	+0.3
3,944,904	+		RR42_RS18205	0.80	+0.2
3,944,905	-		RR42_RS18205	0.81	+0.3
3,945,033	-				+0.5
3,945,056	+				-0.8
3,945,057	-				+0.9
3,945,057	-				+0.2
3,945,175	+				+0.7
3,945,176	-				+0.4
3,945,186	-				+0.5
3,945,245	+				-1.0
3,945,246	-				-0.4
3,945,246	-				-0.9
3,945,338	+				+1.3
3,945,338	+				-0.6
3,945,367	+				-0.4
3,945,394	+				+0.8
3,945,394	+				-0.6
3,945,394	+				+0.8
3,945,394	+				+0.6
3,945,394	+				-0.2
3,945,394	+				-0.1
3,945,394	+				-2.6
3,945,394	+				+0.4
3,945,394	+				+0.0
3,945,395	-				-0.2
3,945,395	-				-1.6
3,945,395	-				+0.4
3,945,395	-				+0.4
3,945,395	-				+0.3
3,945,395	-				-0.0
3,945,395	-				+0.2
3,945,562	+		RR42_RS18210	0.14	-0.1
3,945,692	+		RR42_RS18210	0.22	-0.6
3,945,693	-		RR42_RS18210	0.22	-1.6
3,945,693	-		RR42_RS18210	0.22	+0.3
3,945,706	+		RR42_RS18210	0.23	-1.1
3,945,707	-		RR42_RS18210	0.23	-0.3
3,945,707	-		RR42_RS18210	0.23	+1.8
3,945,886	+		RR42_RS18210	0.34	+0.6
3,945,886	+		RR42_RS18210	0.34	-1.5
3,945,887	-		RR42_RS18210	0.34	+2.7
3,946,108	+		RR42_RS18210	0.48	+0.5
3,946,108	+		RR42_RS18210	0.48	-0.8
3,946,108	+		RR42_RS18210	0.48	-0.7
3,946,109	-		RR42_RS18210	0.48	-0.5
3,946,109	-		RR42_RS18210	0.48	-0.2
3,946,114	+		RR42_RS18210	0.49	-1.5
3,946,115	-		RR42_RS18210	0.49	-0.1
3,946,301	-		RR42_RS18210	0.60	-0.6
3,946,343	-		RR42_RS18210	0.63	-0.1
3,946,343	-		RR42_RS18210	0.63	+0.4
3,946,501	+		RR42_RS18210	0.73	-1.0
3,946,501	+		RR42_RS18210	0.73	+0.6
3,946,502	-		RR42_RS18210	0.73	-0.4
3,946,502	-		RR42_RS18210	0.73	+0.7
3,946,541	-		RR42_RS18210	0.76	-0.7
3,946,786	+				-0.7
3,946,786	+				+0.7
3,946,787	-				+0.5
3,946,787	-				+0.1
3,946,787	-				+0.1
3,946,965	+				+0.3
3,946,965	+				+0.4
3,946,965	+				-2.6
3,946,965	+				-1.0
3,946,966	-				+0.3
3,946,966	-				-0.8
3,946,966	-				+0.2
3,946,968	+				-1.1
3,946,969	-				+0.7
3,946,969	-				-0.8
3,946,969	-				-1.3
3,946,969	-				-0.8
3,946,985	+				+0.2
3,946,986	-				+0.6
3,947,196	-				-0.4
3,947,205	+				-1.8
3,947,206	-				-0.1
3,947,585	+		RR42_RS18215	0.29	+1.3
3,947,585	+		RR42_RS18215	0.29	+0.1
3,947,586	-		RR42_RS18215	0.29	+0.1
3,947,586	-		RR42_RS18215	0.29	+0.5