Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS17380

Experiment: R2A with Sisomicin 0.035 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Sisomicin 0.035 mg/ml
3,759,422	+				-0.8
3,759,563	+		RR42_RS17375	0.34	-0.3
3,759,770	+				-0.6
3,759,771	-				+0.3
3,759,771	-				+1.0
3,759,893	+				+0.6
3,759,894	-				-0.3
3,759,950	+		RR42_RS17380	0.13	-0.5
3,759,951	-		RR42_RS17380	0.13	-1.1
3,759,951	-		RR42_RS17380	0.13	-0.4
3,760,061	+		RR42_RS17380	0.20	-0.4
3,760,061	+		RR42_RS17380	0.20	-0.2
3,760,062	-		RR42_RS17380	0.20	-0.4
3,760,119	+		RR42_RS17380	0.24	+1.0
3,760,119	+		RR42_RS17380	0.24	-0.7
3,760,119	+		RR42_RS17380	0.24	-0.1
3,760,119	+		RR42_RS17380	0.24	+0.6
3,760,120	-		RR42_RS17380	0.24	-0.9
3,760,120	-		RR42_RS17380	0.24	-0.3
3,760,120	-		RR42_RS17380	0.24	-0.3
3,760,199	+		RR42_RS17380	0.30	-1.3
3,760,200	-		RR42_RS17380	0.30	+0.1
3,760,298	+		RR42_RS17380	0.37	-0.6
3,760,298	+		RR42_RS17380	0.37	-0.6
3,760,299	-		RR42_RS17380	0.37	-0.1
3,760,349	+		RR42_RS17380	0.40	+0.1
3,760,398	-		RR42_RS17380	0.43	-0.8
3,760,398	-		RR42_RS17380	0.43	-1.2
3,760,398	-		RR42_RS17380	0.43	-0.2
3,760,617	+		RR42_RS17380	0.59	+0.2
3,760,618	-		RR42_RS17380	0.59	-0.4
3,760,618	-		RR42_RS17380	0.59	-1.0
3,760,618	-		RR42_RS17380	0.59	-1.9
3,760,618	-		RR42_RS17380	0.59	+0.3
3,760,646	+		RR42_RS17380	0.61	+0.5
3,760,646	+		RR42_RS17380	0.61	+0.6
3,760,678	+		RR42_RS17380	0.63	+0.2
3,760,678	+		RR42_RS17380	0.63	-0.9
3,760,678	+		RR42_RS17380	0.63	+0.1
3,760,678	+		RR42_RS17380	0.63	+0.8
3,760,863	-		RR42_RS17380	0.76	-0.6
3,760,863	-		RR42_RS17380	0.76	+0.1
3,760,963	+		RR42_RS17380	0.83	+0.1
3,760,964	-		RR42_RS17380	0.83	+0.4
3,761,293	+				-2.3
3,761,293	+				+0.8
3,761,294	-				+2.1
3,761,294	-				-0.1
3,761,294	-				-0.6
3,761,294	-				+1.3
3,761,306	-				+0.6
3,761,306	-				-0.0
3,761,306	-				-0.3
3,761,499	+				-1.3
3,761,499	+				-0.6
3,761,789	+		RR42_RS17385	0.17	+0.1
3,761,789	+		RR42_RS17385	0.17	-0.0
3,761,789	+		RR42_RS17385	0.17	-0.0
3,761,790	-		RR42_RS17385	0.17	+0.6
3,761,790	-		RR42_RS17385	0.17	+2.3
3,761,874	+		RR42_RS17385	0.26	+0.8
3,761,874	+		RR42_RS17385	0.26	-0.2
3,761,874	+		RR42_RS17385	0.26	+0.5
3,761,874	+		RR42_RS17385	0.26	-0.9
3,761,875	-		RR42_RS17385	0.26	+0.8
3,761,948	-		RR42_RS17385	0.34	-1.5
3,762,098	+		RR42_RS17385	0.49	-0.5
3,762,099	-		RR42_RS17385	0.50	+1.7
3,762,197	+		RR42_RS17385	0.60	-1.3
3,762,197	+		RR42_RS17385	0.60	+0.0
3,762,197	+		RR42_RS17385	0.60	+0.1
3,762,197	+		RR42_RS17385	0.60	+0.4
3,762,198	-		RR42_RS17385	0.60	-0.0
3,762,198	-		RR42_RS17385	0.60	+0.4