Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS16580

Experiment: R2A with Sisomicin 0.035 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Sisomicin 0.035 mg/ml
3,592,412	+		RR42_RS16575	0.40	+1.2
3,592,491	+		RR42_RS16575	0.46	+0.5
3,592,491	+		RR42_RS16575	0.46	-0.7
3,592,491	+		RR42_RS16575	0.46	+0.8
3,592,492	-		RR42_RS16575	0.46	+1.2
3,592,690	-		RR42_RS16575	0.62	-1.2
3,593,257	-				-0.6
3,593,583	+		RR42_RS16580	0.32	-0.1
3,593,637	-		RR42_RS16580	0.37	-0.9
3,593,690	+		RR42_RS16580	0.43	-0.4
3,593,778	-		RR42_RS16580	0.52	-0.8
3,593,778	-		RR42_RS16580	0.52	+0.2
3,594,039	-		RR42_RS16580	0.79	-1.4
3,594,054	-		RR42_RS16580	0.80	-1.4
3,594,313	-				+0.3
3,594,563	-				-0.1
3,594,563	-				+0.5
3,594,699	-				+0.3
3,594,699	-				+0.2
3,594,699	-				+1.1
3,594,744	+				-0.5
3,594,973	+		RR42_RS16585	0.25	-0.4
3,594,990	+		RR42_RS16585	0.28	+0.7
3,595,063	+		RR42_RS16585	0.39	+0.3
3,595,063	+		RR42_RS16585	0.39	+1.2
3,595,064	-		RR42_RS16585	0.39	+0.1
3,595,064	-		RR42_RS16585	0.39	-0.4
3,595,064	-		RR42_RS16585	0.39	-2.1
3,595,064	-		RR42_RS16585	0.39	+1.4
3,595,064	-		RR42_RS16585	0.39	-1.7
3,595,064	-		RR42_RS16585	0.39	-0.0
3,595,078	+		RR42_RS16585	0.42	+0.8
3,595,134	+		RR42_RS16585	0.51	+1.0
3,595,135	-		RR42_RS16585	0.51	+0.2