Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS15775

Experiment: R2A with Sisomicin 0.035 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Sisomicin 0.035 mg/ml
3,408,990	+		RR42_RS15770	0.38	-1.7
3,408,990	+		RR42_RS15770	0.38	-1.0
3,409,239	+		RR42_RS15770	0.54	-2.1
3,409,335	+		RR42_RS15770	0.61	-1.3
3,409,335	+		RR42_RS15770	0.61	-2.0
3,409,417	+		RR42_RS15770	0.66	-1.0
3,409,798	+				-2.3
3,409,818	+				-2.9
3,409,818	+				-3.2
3,409,818	+				-1.2
3,409,819	-				-3.8
3,409,848	-				-0.8
3,409,896	+				-1.3
3,409,897	-				-1.3
3,409,927	-				-2.2
3,409,927	-				-1.7
3,409,927	-				-3.3
3,409,954	-				-0.3
3,409,954	-				+0.1
3,409,954	-				-1.0
3,409,957	-				+0.5
3,409,957	-				-0.4
3,409,957	-				+0.6
3,409,959	+				-1.2
3,409,959	+				-1.9
3,409,959	+				-2.7
3,409,959	+				-0.7
3,409,959	+				-2.7
3,409,960	-				+0.3
3,409,960	-				+0.3
3,409,960	-				-1.1
3,409,960	-				-0.1
3,410,207	-		RR42_RS15775	0.21	-2.3
3,410,207	-		RR42_RS15775	0.21	-1.4
3,410,387	+		RR42_RS15775	0.38	-2.8
3,410,387	+		RR42_RS15775	0.38	-1.6
3,410,388	-		RR42_RS15775	0.38	-3.4
3,410,475	+		RR42_RS15775	0.46	-1.6
3,410,478	-		RR42_RS15775	0.47	-1.9
3,410,621	+		RR42_RS15775	0.60	-2.3
3,410,708	+		RR42_RS15775	0.68	-2.4
3,410,709	-		RR42_RS15775	0.69	-2.0
3,410,785	+		RR42_RS15775	0.76	-1.2
3,410,881	+		RR42_RS15775	0.85	+0.6
3,410,882	-		RR42_RS15775	0.85	-2.7
3,411,042	+				+0.0
3,411,042	+				-0.1
3,411,043	-				-1.3
3,411,045	-				-0.4
3,411,618	-				+1.2
3,411,618	-				+0.2
3,411,772	-		RR42_RS15785	0.16	-2.4
3,411,772	-		RR42_RS15785	0.16	-3.0
3,411,774	-		RR42_RS15785	0.16	-1.1
3,411,949	-		RR42_RS15785	0.32	-2.2
3,411,949	-		RR42_RS15785	0.32	-0.4
3,411,949	-		RR42_RS15785	0.32	-3.3
3,411,976	+		RR42_RS15785	0.35	-1.0