Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS15710

Experiment: R2A with Sisomicin 0.035 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Sisomicin 0.035 mg/ml
3,394,005	-		RR42_RS15705	0.12	-1.3
3,394,200	+		RR42_RS15705	0.30	-1.0
3,394,200	+		RR42_RS15705	0.30	+0.3
3,394,200	+		RR42_RS15705	0.30	-0.4
3,394,200	+		RR42_RS15705	0.30	-0.7
3,394,201	-		RR42_RS15705	0.30	-1.4
3,394,942	+				+1.2
3,395,044	+				-1.1
3,395,122	-		RR42_RS15710	0.10	-1.1
3,395,278	-		RR42_RS15710	0.23	-2.3
3,395,426	+		RR42_RS15710	0.35	-0.6
3,395,427	-		RR42_RS15710	0.35	-0.3
3,395,569	-		RR42_RS15710	0.46	-2.1
3,395,582	-		RR42_RS15710	0.47	-2.6
3,395,766	+		RR42_RS15710	0.62	-2.3
3,395,766	+		RR42_RS15710	0.62	-1.8
3,395,811	+		RR42_RS15710	0.65	-0.2
3,395,811	+		RR42_RS15710	0.65	-0.9
3,395,812	-		RR42_RS15710	0.66	-0.4
3,395,891	-		RR42_RS15710	0.72	-1.7
3,395,943	+		RR42_RS15710	0.76	-0.2
3,396,157	-				-0.1
3,396,158	+				-2.4
3,396,159	-				-0.8
3,396,253	+				+0.6
3,396,253	+				-0.1
3,396,254	-				-1.9
3,396,254	-				-0.7
3,396,254	-				+0.0
3,396,452	+		RR42_RS15715	0.20	-1.4
3,396,452	+		RR42_RS15715	0.20	-0.0
3,396,453	-		RR42_RS15715	0.20	-1.3
3,396,843	+		RR42_RS15715	0.56	-1.1
3,396,843	+		RR42_RS15715	0.56	-0.6
3,396,844	-		RR42_RS15715	0.56	+0.2
3,396,844	-		RR42_RS15715	0.56	-1.5
3,396,997	-		RR42_RS15715	0.70	-2.5
3,397,032	+		RR42_RS15715	0.74	+0.7
3,397,032	+		RR42_RS15715	0.74	-2.4
3,397,033	-		RR42_RS15715	0.74	-1.1
3,397,060	+		RR42_RS15715	0.76	-1.0
3,397,061	-		RR42_RS15715	0.76	-1.4
3,397,098	+		RR42_RS15715	0.80	-1.2
3,397,099	-		RR42_RS15715	0.80	-1.1
3,397,162	-		RR42_RS15715	0.86	-1.5
3,397,162	-		RR42_RS15715	0.86	-0.5
3,397,236	+				+1.0
3,397,237	-				-0.3
3,397,237	-				-1.1
3,397,237	-				-1.4