Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS15035

Experiment: R2A with Sisomicin 0.035 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Sisomicin 0.035 mg/ml
3,249,919	+				+0.2
3,249,920	-				+1.1
3,249,920	-				+1.2
3,249,920	-				+0.3
3,249,920	-				-2.9
3,249,999	+				+0.7
3,250,171	+		RR42_RS15030	0.17	+0.4
3,250,171	+		RR42_RS15030	0.17	-0.2
3,250,171	+		RR42_RS15030	0.17	+2.0
3,250,172	-		RR42_RS15030	0.18	+0.2
3,250,172	-		RR42_RS15030	0.18	+0.2
3,250,277	+		RR42_RS15030	0.30	-1.2
3,250,277	+		RR42_RS15030	0.30	-0.2
3,250,304	-		RR42_RS15030	0.33	+0.4
3,250,325	-		RR42_RS15030	0.35	-0.1
3,250,910	+				+2.2
3,250,910	+				+0.4
3,250,910	+				+0.5
3,250,911	-				+0.4
3,251,082	+		RR42_RS15035	0.22	-0.2
3,251,082	+		RR42_RS15035	0.22	+0.4
3,251,084	+		RR42_RS15035	0.23	-1.2
3,251,085	-		RR42_RS15035	0.23	-0.1
3,251,085	-		RR42_RS15035	0.23	-0.1
3,251,085	-		RR42_RS15035	0.23	-2.3
3,251,118	-		RR42_RS15035	0.27	-2.8
3,251,150	+		RR42_RS15035	0.31	-0.2
3,251,151	-		RR42_RS15035	0.31	-0.0
3,251,311	-		RR42_RS15035	0.52	-1.2
3,251,311	-		RR42_RS15035	0.52	-0.3
3,251,370	+		RR42_RS15035	0.59	-1.0
3,251,676	+				-1.5
3,251,714	+				-0.2
3,251,715	-				-0.8
3,251,821	+				-0.8
3,251,821	+				-0.0
3,251,821	+				+0.1
3,251,822	-				+0.5
3,251,825	+				-1.4
3,251,825	+				+0.0
3,251,826	-				-1.3
3,251,826	-				-0.4
3,251,996	+				-1.2
3,252,134	+		RR42_RS15040	0.25	+2.7
3,252,135	-		RR42_RS15040	0.25	+0.2
3,252,135	-		RR42_RS15040	0.25	-2.0
3,252,142	+		RR42_RS15040	0.26	+0.0
3,252,142	+		RR42_RS15040	0.26	+0.7
3,252,143	-		RR42_RS15040	0.26	+0.1
3,252,143	-		RR42_RS15040	0.26	+0.6
3,252,143	-		RR42_RS15040	0.26	-0.5
3,252,225	-		RR42_RS15040	0.35	+0.0
3,252,256	-		RR42_RS15040	0.39	-1.0
3,252,266	+		RR42_RS15040	0.40	-3.0
3,252,276	+		RR42_RS15040	0.41	-0.3
3,252,276	+		RR42_RS15040	0.41	-0.6
3,252,276	+		RR42_RS15040	0.41	-0.2
3,252,322	-		RR42_RS15040	0.46	-0.3
3,252,482	+		RR42_RS15040	0.65	-1.3
3,252,483	-		RR42_RS15040	0.65	+0.1
3,252,483	-		RR42_RS15040	0.65	+0.2
3,252,483	-		RR42_RS15040	0.65	+1.2