Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS14595

Experiment: R2A with Sisomicin 0.035 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Sisomicin 0.035 mg/ml
3,138,806	+				-0.0
3,138,806	+				-0.5
3,138,806	+				+1.1
3,138,806	+				+0.4
3,138,806	+				+1.5
3,138,806	+				+1.0
3,138,806	+				-0.1
3,138,807	-				-0.2
3,138,807	-				+0.0
3,138,876	+		RR42_RS14585	0.15	+0.2
3,138,876	+		RR42_RS14585	0.15	+1.3
3,138,876	+		RR42_RS14585	0.15	+0.2
3,138,876	+		RR42_RS14585	0.15	-0.8
3,138,877	-		RR42_RS14585	0.15	+1.1
3,138,877	-		RR42_RS14585	0.15	+0.3
3,138,877	-		RR42_RS14585	0.15	+0.4
3,138,877	-		RR42_RS14585	0.15	+0.5
3,138,903	-		RR42_RS14585	0.21	+1.5
3,138,903	-		RR42_RS14585	0.21	+1.1
3,139,263	+				-0.4
3,139,264	-				+0.5
3,139,264	-				+0.5
3,139,264	-				+0.4
3,139,264	-				+1.1
3,139,508	-		RR42_RS14590	0.40	+0.5
3,139,508	-		RR42_RS14590	0.40	-0.5
3,139,581	+		RR42_RS14590	0.62	-0.4
3,139,630	+		RR42_RS14590	0.77	+1.1
3,139,631	-		RR42_RS14590	0.78	+1.0
3,139,692	+				-0.7
3,139,830	+				+1.5
3,139,936	+		RR42_RS14595	0.16	-1.1
3,139,954	+		RR42_RS14595	0.18	+0.2
3,139,955	-		RR42_RS14595	0.18	+0.6
3,139,955	-		RR42_RS14595	0.18	-0.0
3,139,955	-		RR42_RS14595	0.18	+0.5
3,140,101	+		RR42_RS14595	0.30	-0.1
3,140,102	-		RR42_RS14595	0.30	+0.6
3,140,225	-		RR42_RS14595	0.40	-0.8
3,140,353	+		RR42_RS14595	0.51	-0.7
3,140,354	-		RR42_RS14595	0.51	-0.8
3,140,407	+		RR42_RS14595	0.56	-0.5
3,140,407	+		RR42_RS14595	0.56	+0.6
3,140,408	-		RR42_RS14595	0.56	+0.4
3,140,408	-		RR42_RS14595	0.56	-1.0
3,140,521	-		RR42_RS14595	0.65	+1.1
3,140,548	+		RR42_RS14595	0.68	-0.7
3,140,548	+		RR42_RS14595	0.68	-3.0
3,140,548	+		RR42_RS14595	0.68	+3.1
3,140,767	+		RR42_RS14595	0.86	+0.1
3,140,767	+		RR42_RS14595	0.86	+2.1
3,140,767	+		RR42_RS14595	0.86	+0.4
3,140,767	+		RR42_RS14595	0.86	-0.8
3,140,768	-		RR42_RS14595	0.86	+0.7
3,140,768	-		RR42_RS14595	0.86	+0.6
3,140,962	+				-1.6
3,140,963	-				+0.5
3,140,963	-				+0.5
3,141,006	+				-2.9
3,141,096	+				-1.2
3,141,217	+		RR42_RS14600	0.20	+0.1
3,141,217	+		RR42_RS14600	0.20	-1.8
3,141,217	+		RR42_RS14600	0.20	+1.5
3,141,217	+		RR42_RS14600	0.20	+0.2
3,141,217	+		RR42_RS14600	0.20	-1.2
3,141,218	-		RR42_RS14600	0.20	+1.1
3,141,218	-		RR42_RS14600	0.20	+1.5
3,141,218	-		RR42_RS14600	0.20	+0.7
3,141,218	-		RR42_RS14600	0.20	+1.1
3,141,296	+		RR42_RS14600	0.32	-0.2
3,141,296	+		RR42_RS14600	0.32	-0.2
3,141,296	+		RR42_RS14600	0.32	+0.7
3,141,297	-		RR42_RS14600	0.32	-0.5
3,141,297	-		RR42_RS14600	0.32	+0.8
3,141,297	-		RR42_RS14600	0.32	+0.0
3,141,326	-		RR42_RS14600	0.37	+0.1
3,141,745	+				+0.6
3,141,745	+				-0.0
3,141,745	+				+1.5
3,141,746	-				+1.4
3,141,746	-				-0.8
3,141,746	-				+0.5
3,141,770	-				+0.1
3,141,907	+		RR42_RS14605	0.21	+1.1
3,141,907	+		RR42_RS14605	0.21	+1.8
3,141,907	+		RR42_RS14605	0.21	-0.5
3,141,907	+		RR42_RS14605	0.21	-0.1
3,141,908	-		RR42_RS14605	0.21	-1.4
3,141,908	-		RR42_RS14605	0.21	-0.9
3,141,908	-		RR42_RS14605	0.21	+0.5