Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS10320

Experiment: R2A with Sisomicin 0.035 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Sisomicin 0.035 mg/ml
2,206,539	+		RR42_RS10315	0.17	-0.1
2,206,539	+		RR42_RS10315	0.17	-1.0
2,206,548	+		RR42_RS10315	0.18	+0.3
2,206,696	+		RR42_RS10315	0.38	+0.2
2,206,696	+		RR42_RS10315	0.38	+0.4
2,206,696	+		RR42_RS10315	0.38	-0.2
2,206,729	-		RR42_RS10315	0.42	+0.1
2,206,935	-		RR42_RS10315	0.69	+0.1
2,207,081	-		RR42_RS10315	0.88	+0.7
2,207,185	+				-0.9
2,207,186	-				+0.5
2,207,186	-				+0.9
2,207,218	-				-0.1
2,207,450	+		RR42_RS10320	0.27	-0.7
2,207,451	-		RR42_RS10320	0.27	+0.7
2,207,451	-		RR42_RS10320	0.27	+0.1
2,207,484	+		RR42_RS10320	0.31	-1.7
2,207,548	+		RR42_RS10320	0.40	-0.8
2,207,549	-		RR42_RS10320	0.40	-1.1
2,207,557	+		RR42_RS10320	0.41	-0.3
2,207,558	-		RR42_RS10320	0.41	-1.5
2,207,558	-		RR42_RS10320	0.41	-0.6
2,207,558	-		RR42_RS10320	0.41	-0.6
2,207,675	+		RR42_RS10320	0.56	-0.1
2,207,676	-		RR42_RS10320	0.56	+1.3
2,207,895	-		RR42_RS10320	0.85	-1.4
2,207,895	-		RR42_RS10320	0.85	-0.6
2,207,989	-				-0.5
2,208,157	+				+0.4
2,208,180	+				+1.3
2,208,180	+				+0.5
2,208,317	+				+0.9
2,208,318	-				-0.9
2,208,335	+				-0.6
2,208,344	+				+0.2
2,208,345	-				+0.4
2,208,389	+				+0.5
2,208,389	+				-0.3
2,208,390	-				-0.1
2,208,390	-				+0.3
2,208,509	+				+0.4
2,208,510	-				+0.3
2,208,510	-				-1.5
2,208,513	+				-1.2
2,208,514	-				-1.0
2,208,514	-				-0.5
2,208,978	+		RR42_RS10325	0.32	+0.6
2,208,978	+		RR42_RS10325	0.32	+0.1
2,208,978	+		RR42_RS10325	0.32	-0.1
2,208,979	-		RR42_RS10325	0.32	+0.2
2,208,979	-		RR42_RS10325	0.32	+1.6
2,208,979	-		RR42_RS10325	0.32	+1.6
2,208,979	-		RR42_RS10325	0.32	-1.1
2,208,980	+		RR42_RS10325	0.32	+0.8
2,208,980	+		RR42_RS10325	0.32	-0.5
2,208,981	-		RR42_RS10325	0.32	+0.1
2,208,981	-		RR42_RS10325	0.32	+0.7
2,208,981	-		RR42_RS10325	0.32	-0.1
2,208,981	-		RR42_RS10325	0.32	-0.5
2,208,981	-		RR42_RS10325	0.32	-0.5
2,208,981	-		RR42_RS10325	0.32	-0.2