Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS09375

Experiment: R2A with Sisomicin 0.035 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Sisomicin 0.035 mg/ml
1,983,602	-		RR42_RS09370	0.40	+2.4
1,983,830	+		RR42_RS09370	0.62	-0.4
1,983,830	+		RR42_RS09370	0.62	-1.7
1,983,831	-		RR42_RS09370	0.62	+0.6
1,983,831	-		RR42_RS09370	0.62	+0.2
1,983,836	+		RR42_RS09370	0.62	+0.3
1,983,837	-		RR42_RS09370	0.62	-0.3
1,983,837	-		RR42_RS09370	0.62	-1.0
1,984,085	-		RR42_RS09370	0.86	+0.9
1,984,085	-		RR42_RS09370	0.86	+0.2
1,984,169	-				-1.1
1,984,240	+				-0.8
1,984,312	-				-0.3
1,984,365	-				-0.1
1,984,365	-				-0.9
1,984,892	+		RR42_RS09375	0.71	+1.1
1,985,089	+				-0.2
1,985,121	+				-0.2
1,985,122	-				-0.0
1,985,151	-				+0.2
1,985,321	+		RR42_RS09380	0.18	+0.2
1,985,321	+		RR42_RS09380	0.18	-0.1
1,985,322	-		RR42_RS09380	0.18	-0.2
1,985,322	-		RR42_RS09380	0.18	+0.4
1,985,349	-		RR42_RS09380	0.20	+0.1
1,985,552	+		RR42_RS09380	0.41	+0.3
1,985,738	+		RR42_RS09380	0.60	-1.5
1,985,993	+		RR42_RS09380	0.86	-1.1
1,985,993	+		RR42_RS09380	0.86	+0.9
1,985,994	-		RR42_RS09380	0.86	+0.1
1,985,994	-		RR42_RS09380	0.86	+0.6