Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS09010

Experiment: R2A with Sisomicin 0.035 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Sisomicin 0.035 mg/ml
1,891,094	+		RR42_RS09005	0.31	-0.0
1,891,094	+		RR42_RS09005	0.31	+0.4
1,891,094	+		RR42_RS09005	0.31	+0.2
1,891,094	+		RR42_RS09005	0.31	-0.2
1,891,095	-		RR42_RS09005	0.31	+0.4
1,891,095	-		RR42_RS09005	0.31	-0.1
1,891,141	+		RR42_RS09005	0.37	+1.4
1,891,151	+		RR42_RS09005	0.38	+0.4
1,891,152	-		RR42_RS09005	0.38	-0.3
1,891,152	-		RR42_RS09005	0.38	+0.2
1,891,169	+		RR42_RS09005	0.40	+0.0
1,891,169	+		RR42_RS09005	0.40	+0.1
1,891,170	-		RR42_RS09005	0.40	+0.5
1,891,170	-		RR42_RS09005	0.40	+0.1
1,891,170	-		RR42_RS09005	0.40	+0.4
1,891,251	-		RR42_RS09005	0.50	-2.6
1,891,251	-		RR42_RS09005	0.50	+1.2
1,891,251	-		RR42_RS09005	0.50	-0.6
1,891,430	+		RR42_RS09005	0.70	+0.7
1,891,542	-		RR42_RS09005	0.83	+0.7
1,891,542	-		RR42_RS09005	0.83	+0.3
1,891,572	-		RR42_RS09005	0.87	+1.2
1,891,572	-		RR42_RS09005	0.87	-0.7
1,891,757	+				-0.1
1,891,758	-				-1.6
1,891,758	-				-0.2
1,891,758	-				-0.0
1,891,942	+				-0.2
1,891,942	+				+0.7
1,891,942	+				-0.6
1,891,943	-				+0.3
1,891,984	-				-0.5
1,892,007	+				+0.3
1,892,045	+				-1.9
1,892,046	-				-1.8
1,892,046	-				-0.3
1,892,046	-				-0.2
1,892,046	-				-0.1
1,892,462	+		RR42_RS09010	0.26	-0.4
1,892,463	-		RR42_RS09010	0.26	+0.2
1,893,297	+		RR42_RS09010	0.68	+1.8
1,893,329	+		RR42_RS09010	0.69	-0.3
1,893,329	+		RR42_RS09010	0.69	+0.6
1,893,330	-		RR42_RS09010	0.69	+1.9
1,893,330	-		RR42_RS09010	0.69	-0.0
1,893,477	+		RR42_RS09010	0.76	+1.1
1,893,477	+		RR42_RS09010	0.76	+0.4
1,893,616	-		RR42_RS09010	0.83	-0.0
1,893,765	+				+0.7
1,893,765	+				+1.6
1,893,766	-				-1.3
1,893,766	-				+0.0
1,893,766	-				-2.3
1,894,633	+		RR42_RS09015	0.33	-0.0
1,894,633	+		RR42_RS09015	0.33	-2.0