Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS07835

Experiment: R2A with Sisomicin 0.035 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Sisomicin 0.035 mg/ml
1,677,863	+		RR42_RS07830	0.55	+0.4
1,677,863	+		RR42_RS07830	0.55	+2.0
1,677,863	+		RR42_RS07830	0.55	+0.7
1,677,863	+		RR42_RS07830	0.55	-0.7
1,677,864	-		RR42_RS07830	0.55	-0.6
1,677,864	-		RR42_RS07830	0.55	+1.0
1,677,864	-		RR42_RS07830	0.55	-0.8
1,677,864	-		RR42_RS07830	0.55	-0.4
1,677,864	-		RR42_RS07830	0.55	-0.8
1,677,864	-		RR42_RS07830	0.55	+0.3
1,677,864	-		RR42_RS07830	0.55	-0.1
1,678,017	+		RR42_RS07830	0.66	-1.0
1,678,018	-		RR42_RS07830	0.66	-0.7
1,678,018	-		RR42_RS07830	0.66	-1.8
1,678,018	-		RR42_RS07830	0.66	-1.0
1,678,039	+		RR42_RS07830	0.68	+0.4
1,678,039	+		RR42_RS07830	0.68	-1.4
1,678,243	+		RR42_RS07830	0.82	-0.3
1,678,638	+				-0.2
1,678,638	+				+1.0
1,678,638	+				+0.1
1,678,639	-				+0.3
1,678,639	-				+0.2
1,678,639	-				+1.0
1,678,639	-				+0.4
1,678,639	-				-0.4
1,678,639	-				-0.0
1,678,639	-				-0.8
1,678,806	+		RR42_RS07835	0.18	+0.4
1,678,807	-		RR42_RS07835	0.18	-1.0
1,678,947	+		RR42_RS07835	0.29	-0.1
1,678,947	+		RR42_RS07835	0.29	+0.3
1,679,058	+		RR42_RS07835	0.38	+0.1
1,679,059	-		RR42_RS07835	0.38	+0.7
1,679,070	+		RR42_RS07835	0.38	+0.6
1,679,070	+		RR42_RS07835	0.38	-0.5
1,679,070	+		RR42_RS07835	0.38	-0.4
1,679,070	+		RR42_RS07835	0.38	-1.4
1,679,070	+		RR42_RS07835	0.38	-0.0
1,679,070	+		RR42_RS07835	0.38	-0.3
1,679,071	-		RR42_RS07835	0.39	-1.3
1,679,071	-		RR42_RS07835	0.39	+0.4
1,679,071	-		RR42_RS07835	0.39	-1.5
1,679,071	-		RR42_RS07835	0.39	-0.3
1,679,071	-		RR42_RS07835	0.39	+1.2
1,679,071	-		RR42_RS07835	0.39	+0.7
1,679,082	+		RR42_RS07835	0.39	+1.9
1,679,082	+		RR42_RS07835	0.39	+0.1
1,679,224	-		RR42_RS07835	0.50	+0.2
1,679,224	-		RR42_RS07835	0.50	+0.9
1,679,224	-		RR42_RS07835	0.50	+0.2
1,679,224	-		RR42_RS07835	0.50	+1.0
1,679,226	+		RR42_RS07835	0.50	-0.4
1,679,227	-		RR42_RS07835	0.50	+0.3
1,679,227	-		RR42_RS07835	0.50	-1.0
1,679,512	-		RR42_RS07835	0.72	+0.1
1,679,601	+		RR42_RS07835	0.79	+0.4
1,679,737	-		RR42_RS07835	0.90	-0.3
1,680,309	+		RR42_RS07840	0.27	+0.2
1,680,309	+		RR42_RS07840	0.27	-0.6
1,680,310	-		RR42_RS07840	0.28	-0.4
1,680,469	-		RR42_RS07840	0.41	+1.4
1,680,705	+		RR42_RS07840	0.60	-0.5
1,680,706	-		RR42_RS07840	0.60	-1.3
1,680,706	-		RR42_RS07840	0.60	-1.6
1,680,751	-		RR42_RS07840	0.64	+0.5
1,680,751	-		RR42_RS07840	0.64	+0.3
1,680,751	-		RR42_RS07840	0.64	-1.2