Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS06420

Experiment: R2A with Sisomicin 0.035 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Sisomicin 0.035 mg/ml
1,405,778	+				+1.0
1,405,778	+				+0.7
1,405,779	-				-0.8
1,405,779	-				+0.1
1,406,240	+		RR42_RS06415	0.73	+1.7
1,406,240	+		RR42_RS06415	0.73	-1.0
1,406,240	+		RR42_RS06415	0.73	-0.2
1,406,386	+				-0.2
1,406,387	-				+0.2
1,406,395	-				+0.5
1,406,517	+				-0.1
1,406,518	-				+0.2
1,406,551	+				-0.5
1,406,559	+				-0.5
1,406,560	-				+0.1
1,406,560	-				-0.8
1,406,560	-				-0.8
1,406,560	-				+0.1
1,406,560	-				-0.5
1,406,574	-				-0.9
1,406,682	-				-1.3
1,406,742	+				+0.1
1,406,742	+				+0.1
1,406,742	+				-0.2
1,406,742	+				-0.7
1,406,742	+				+2.1
1,406,743	-				-0.2
1,406,835	+		RR42_RS06420	0.18	+0.1
1,406,836	-		RR42_RS06420	0.19	+1.3
1,406,985	+		RR42_RS06420	0.41	+0.1
1,406,986	-		RR42_RS06420	0.42	+0.7
1,406,986	-		RR42_RS06420	0.42	+1.0
1,407,103	-		RR42_RS06420	0.60	+1.2
1,407,139	+		RR42_RS06420	0.65	+1.9
1,407,185	-		RR42_RS06420	0.72	+0.9
1,407,185	-		RR42_RS06420	0.72	+0.2
1,407,185	-		RR42_RS06420	0.72	-0.7
1,407,367	-				+0.5
1,407,668	-				+0.9
1,407,756	+		RR42_RS06425	0.16	-0.1
1,407,963	+		RR42_RS06425	0.54	-0.6
1,407,964	-		RR42_RS06425	0.54	+0.5
1,408,088	+		RR42_RS06425	0.77	-0.7
1,408,088	+		RR42_RS06425	0.77	+0.5
1,408,089	-		RR42_RS06425	0.77	-0.0
1,408,089	-		RR42_RS06425	0.77	-0.1
1,408,089	-		RR42_RS06425	0.77	+0.4
1,408,089	-		RR42_RS06425	0.77	-0.2
1,408,153	+		RR42_RS06425	0.89	+0.3
1,408,154	-		RR42_RS06425	0.89	-0.3
1,408,167	-				+0.8
1,408,239	+				-0.0
1,408,355	+		RR42_RS06430	0.24	-1.2
1,408,356	-		RR42_RS06430	0.25	-0.2