Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS06395

Experiment: R2A with Sisomicin 0.035 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Sisomicin 0.035 mg/ml
1,400,933	+		RR42_RS06390	0.10	+0.6
1,401,016	-		RR42_RS06390	0.19	-0.8
1,401,177	-		RR42_RS06390	0.37	+0.8
1,401,177	-		RR42_RS06390	0.37	-0.2
1,401,337	+		RR42_RS06390	0.54	+0.1
1,401,337	+		RR42_RS06390	0.54	-0.4
1,401,337	+		RR42_RS06390	0.54	-0.2
1,401,338	-		RR42_RS06390	0.54	-0.4
1,401,338	-		RR42_RS06390	0.54	-0.5
1,401,408	-		RR42_RS06390	0.62	-1.5
1,401,563	+		RR42_RS06390	0.79	+0.1
1,401,563	+		RR42_RS06390	0.79	+0.1
1,401,563	+		RR42_RS06390	0.79	+1.5
1,401,564	-		RR42_RS06390	0.79	+0.2
1,401,759	+				+0.2
1,401,760	-				-0.1
1,401,760	-				+0.2
1,401,760	-				+0.5
1,401,763	+				+0.2
1,401,764	-				+0.0
1,401,778	-				+0.6
1,401,790	+				-0.9
1,401,947	+		RR42_RS06395	0.24	-0.2
1,401,948	-		RR42_RS06395	0.24	-1.0
1,402,088	+		RR42_RS06395	0.47	-0.8
1,402,089	-		RR42_RS06395	0.48	-0.7
1,402,170	-		RR42_RS06395	0.61	-0.3
1,402,187	+		RR42_RS06395	0.64	-0.6
1,402,188	-		RR42_RS06395	0.64	-0.8
1,402,265	+		RR42_RS06395	0.77	-1.0
1,402,266	-		RR42_RS06395	0.77	-0.7
1,402,266	-		RR42_RS06395	0.77	+0.1
1,402,301	+		RR42_RS06395	0.83	+2.1
1,402,301	+		RR42_RS06395	0.83	+0.1
1,402,302	-		RR42_RS06395	0.83	-1.3
1,402,307	+		RR42_RS06395	0.84	+1.3
1,402,538	-				+0.1
1,402,611	+				+0.6
1,402,612	-				-0.4
1,402,713	+				+0.2
1,402,713	+				+0.5
1,402,714	-				+0.1
1,402,714	-				+0.4
1,402,714	-				+0.3
1,402,714	-				-2.8
1,402,714	-				+1.1
1,402,767	+				-0.3
1,402,767	+				+1.6
1,402,768	-				+0.6
1,402,893	+		RR42_RS06400	0.17	-0.1
1,402,894	-		RR42_RS06400	0.17	-0.1
1,402,958	-		RR42_RS06400	0.21	-1.1
1,402,999	+		RR42_RS06400	0.24	+0.6
1,403,000	-		RR42_RS06400	0.24	+0.7
1,403,006	+		RR42_RS06400	0.24	+0.4
1,403,007	-		RR42_RS06400	0.24	-2.3
1,403,088	+		RR42_RS06400	0.29	-0.4
1,403,265	+		RR42_RS06400	0.40	-0.1
1,403,266	-		RR42_RS06400	0.40	+0.5