Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS05895

Experiment: R2A with Sisomicin 0.035 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Sisomicin 0.035 mg/ml
1,298,419	-		RR42_RS05890	0.76	-0.9
1,298,451	+		RR42_RS05890	0.77	-1.0
1,298,461	-		RR42_RS05890	0.77	-2.0
1,298,859	+				-0.7
1,298,859	-				-0.2
1,298,860	-				-2.4
1,298,860	-				-0.4
1,298,860	-				+0.4
1,298,860	-				+0.5
1,298,860	-				-0.7
1,299,195	+				+0.9
1,299,229	+		RR42_RS05895	0.14	+1.2
1,299,229	+		RR42_RS05895	0.14	+0.5
1,299,263	+		RR42_RS05895	0.20	+0.5
1,299,721	-				+0.1
1,299,771	-				+0.1
1,300,074	-		RR42_RS05900	0.14	-0.7
1,300,074	-		RR42_RS05900	0.14	-0.3
1,300,074	-		RR42_RS05900	0.14	+1.7
1,300,074	-		RR42_RS05900	0.14	-1.2
1,300,223	+		RR42_RS05900	0.22	+1.1
1,300,223	+		RR42_RS05900	0.22	+0.0
1,300,223	+		RR42_RS05900	0.22	-1.7
1,300,223	+		RR42_RS05900	0.22	+1.1
1,300,224	-		RR42_RS05900	0.23	-0.2
1,300,224	-		RR42_RS05900	0.23	-0.5
1,300,364	+		RR42_RS05900	0.31	-1.9
1,300,365	-		RR42_RS05900	0.31	-0.7
1,300,365	-		RR42_RS05900	0.31	+0.7
1,300,365	-		RR42_RS05900	0.31	+0.0
1,300,714	-		RR42_RS05900	0.52	+0.3
1,300,761	+		RR42_RS05900	0.54	+0.5
1,300,761	+		RR42_RS05900	0.54	+0.8
1,300,761	+		RR42_RS05900	0.54	-0.2
1,300,761	+		RR42_RS05900	0.54	-0.4
1,300,761	+		RR42_RS05900	0.54	-0.1
1,300,761	+		RR42_RS05900	0.54	+0.6
1,300,762	-		RR42_RS05900	0.54	+0.1
1,300,762	-		RR42_RS05900	0.54	-0.2
1,300,762	-		RR42_RS05900	0.54	-0.5
1,300,762	-		RR42_RS05900	0.54	-0.5