Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS05710

Experiment: R2A with Sisomicin 0.035 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Sisomicin 0.035 mg/ml
1,254,439	+				+0.0
1,254,458	+				+0.6
1,254,459	-				-0.9
1,254,459	-				+0.1
1,254,461	+				-0.1
1,254,461	+				+0.9
1,254,462	-				-0.5
1,254,555	+				+0.6
1,254,555	+				+0.3
1,254,555	+				+0.8
1,254,556	-				-0.4
1,254,592	-				+2.7
1,254,602	+				-0.5
1,254,626	+				-0.2
1,254,627	-				+0.5
1,254,709	+		RR42_RS05705	0.12	+0.2
1,254,709	+		RR42_RS05705	0.12	-0.6
1,254,709	+		RR42_RS05705	0.12	+0.1
1,254,710	-		RR42_RS05705	0.12	+0.1
1,254,710	-		RR42_RS05705	0.12	+0.7
1,254,710	-		RR42_RS05705	0.12	+0.5
1,254,753	+		RR42_RS05705	0.17	-0.5
1,254,753	+		RR42_RS05705	0.17	+0.3
1,254,753	+		RR42_RS05705	0.17	-0.0
1,254,753	+		RR42_RS05705	0.17	+0.3
1,254,754	-		RR42_RS05705	0.17	+1.5
1,254,754	-		RR42_RS05705	0.17	-2.5
1,254,754	-		RR42_RS05705	0.17	-0.2
1,254,888	+		RR42_RS05705	0.35	-1.0
1,254,888	+		RR42_RS05705	0.35	+0.9
1,254,889	-		RR42_RS05705	0.35	-0.3
1,254,889	-		RR42_RS05705	0.35	-0.1
1,255,005	+		RR42_RS05705	0.50	-1.3
1,255,005	+				+0.1
1,255,005	+		RR42_RS05705	0.50	-1.1
1,255,006	-		RR42_RS05705	0.51	+0.1
1,255,006	-		RR42_RS05705	0.51	+0.3
1,255,183	+		RR42_RS05705	0.74	-0.6
1,255,233	+		RR42_RS05705	0.80	+0.4
1,255,234	-		RR42_RS05705	0.80	-0.5
1,255,234	-		RR42_RS05705	0.80	-0.1
1,255,730	-		RR42_RS05710	0.45	+0.1
1,255,750	+		RR42_RS05710	0.48	+1.5
1,255,750	+		RR42_RS05710	0.48	+0.5
1,255,750	+		RR42_RS05710	0.48	+0.3
1,255,750	+		RR42_RS05710	0.48	+0.7
1,255,750	+		RR42_RS05710	0.48	+0.1
1,255,750	+		RR42_RS05710	0.48	+0.5
1,255,750	+		RR42_RS05710	0.48	-1.2
1,255,750	+		RR42_RS05710	0.48	-0.3
1,255,751	-		RR42_RS05710	0.48	+0.4
1,255,751	-		RR42_RS05710	0.48	+0.2
1,255,751	-		RR42_RS05710	0.48	-0.6
1,255,751	-		RR42_RS05710	0.48	+1.5
1,255,828	+		RR42_RS05710	0.59	+0.1
1,255,828	+		RR42_RS05710	0.59	+0.8
1,255,829	-		RR42_RS05710	0.60	+0.1
1,255,880	-		RR42_RS05710	0.67	+1.1
1,256,032	+		RR42_RS05710	0.89	+0.1
1,256,033	-		RR42_RS05710	0.89	+2.1
1,256,033	-		RR42_RS05710	0.89	+0.9
1,256,095	+				-0.0
1,256,185	+				-0.2
1,256,185	+				-0.2
1,256,185	+				+0.3
1,256,299	-				-0.9
1,256,586	+		RR42_RS05715	0.23	-0.4
1,256,586	+		RR42_RS05715	0.23	+0.9
1,256,587	-		RR42_RS05715	0.23	+1.0
1,256,587	-		RR42_RS05715	0.23	-1.0
1,256,587	-		RR42_RS05715	0.23	-1.7
1,257,008	-		RR42_RS05715	0.56	-1.5
1,257,009	+		RR42_RS05715	0.56	+0.5
1,257,009	+		RR42_RS05715	0.56	-0.9
1,257,009	+		RR42_RS05715	0.56	-0.2
1,257,009	+		RR42_RS05715	0.56	-0.5
1,257,009	+		RR42_RS05715	0.56	+0.3
1,257,010	-		RR42_RS05715	0.56	+0.1
1,257,010	-		RR42_RS05715	0.56	-1.7
1,257,069	+		RR42_RS05715	0.61	+0.3
1,257,069	+		RR42_RS05715	0.61	+0.4
1,257,069	+		RR42_RS05715	0.61	+0.2
1,257,070	-		RR42_RS05715	0.61	-0.9
1,257,070	-		RR42_RS05715	0.61	+0.2
1,257,103	+		RR42_RS05715	0.64	+0.3
1,257,103	+		RR42_RS05715	0.64	+1.1
1,257,103	+		RR42_RS05715	0.64	+0.3
1,257,103	+		RR42_RS05715	0.64	-0.3
1,257,104	-		RR42_RS05715	0.64	+0.2