Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_2856

Experiment: KB with Ampicillin 15.6 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Ampicillin 15.6 ug/ml
3,426,970	+		Psyr_2855	0.21	-0.6
3,426,970	+		Psyr_2855	0.21	-1.7
3,426,976	+		Psyr_2855	0.21	-1.3
3,426,976	+		Psyr_2855	0.21	-3.4
3,427,021	+		Psyr_2855	0.25	-2.0
3,427,194	-		Psyr_2855	0.42	-0.3
3,427,369	+				-1.7
3,427,390	+		Psyr_2855	0.61	-2.7
3,427,390	+		Psyr_2855	0.61	-1.2
3,427,390	+		Psyr_2855	0.61	-0.4
3,427,391	-		Psyr_2855	0.61	+2.7
3,427,391	-		Psyr_2855	0.61	-2.8
3,427,461	-		Psyr_2855	0.68	-2.6
3,427,799	+				-0.3
3,427,799	+				+0.1
3,427,799	+				+0.2
3,427,799	+				+0.6
3,427,800	-				+0.0
3,427,800	-				-0.0
3,427,800	-				+0.6
3,427,876	+				-1.1
3,427,876	+				-0.2
3,427,876	+				-0.0
3,427,876	+				-2.0
3,427,876	+				-0.0
3,427,876	+				-0.8
3,427,876	+				-1.0
3,427,877	-				-0.6
3,427,941	+				+0.6
3,428,079	+		Psyr_2856	0.18	-0.0
3,428,080	-		Psyr_2856	0.18	+1.2
3,428,080	-		Psyr_2856	0.18	+0.2
3,428,192	+		Psyr_2856	0.33	+0.2
3,428,192	+		Psyr_2856	0.33	-1.6
3,428,193	-		Psyr_2856	0.33	+0.7
3,428,193	-		Psyr_2856	0.33	-1.2
3,428,193	-		Psyr_2856	0.33	-0.1
3,428,193	-		Psyr_2856	0.33	+0.6
3,428,193	-				+0.6
3,428,193	-		Psyr_2856	0.33	+0.3
3,428,256	+		Psyr_2856	0.41	-0.0
3,428,257	-		Psyr_2856	0.42	-2.0
3,428,284	+		Psyr_2856	0.45	+0.3
3,428,284	+		Psyr_2856	0.45	+0.4
3,428,285	-		Psyr_2856	0.45	-0.2
3,428,285	-		Psyr_2856	0.45	+0.5
3,428,285	-		Psyr_2856	0.45	+0.6
3,428,294	+		Psyr_2856	0.47	-1.3
3,428,304	+		Psyr_2856	0.48	-0.0
3,428,304	+		Psyr_2856	0.48	-0.5
3,428,305	-		Psyr_2856	0.48	+1.2
3,428,377	+		Psyr_2856	0.58	-0.0
3,428,446	+		Psyr_2856	0.67	+0.2
3,428,446	+		Psyr_2856	0.67	+0.4
3,428,446	+		Psyr_2856	0.67	-0.3
3,428,446	+		Psyr_2856	0.67	-0.6
3,428,446	+		Psyr_2856	0.67	+0.2
3,428,447	-				+0.6
3,428,447	-		Psyr_2856	0.67	-0.4
3,428,447	-		Psyr_2856	0.67	-1.2
3,428,505	+		Psyr_2856	0.75	-1.2
3,428,508	+		Psyr_2856	0.75	+1.0
3,428,509	-		Psyr_2856	0.75	-1.3
3,428,509	-		Psyr_2856	0.75	+0.1
3,428,624	+				-0.2
3,428,625	-				+0.8
3,428,625	-				-0.6
3,428,625	-				-0.7
3,428,650	+				+0.2
3,428,697	+				-0.5
3,428,698	-				+0.8
3,428,707	+				+0.4
3,428,708	-				+0.9
3,428,767	-				-0.5
3,428,770	+				+0.4
3,428,771	-				-0.8
3,428,771	-				+0.1
3,428,771	-				-0.3
3,428,854	+				+1.4
3,428,937	+		Psyr_2857	0.15	+0.1
3,428,937	+		Psyr_2857	0.15	-0.2
3,428,938	-		Psyr_2857	0.16	-0.1
3,428,938	-		Psyr_2857	0.16	+0.3
3,428,938	-		Psyr_2857	0.16	+0.5
3,428,940	+		Psyr_2857	0.16	+0.1
3,428,940	+		Psyr_2857	0.16	+0.3
3,428,941	-		Psyr_2857	0.16	-0.5
3,428,949	+		Psyr_2857	0.19	+0.1
3,428,967	-		Psyr_2857	0.23	+0.5
3,429,195	+		Psyr_2857	0.84	-0.5
3,429,196	-		Psyr_2857	0.84	+0.7
3,429,196	-		Psyr_2857	0.84	+0.3
3,429,240	+				+0.2
3,429,240	+				+0.5
3,429,241	-				-0.4
3,429,241	-				-1.2
3,429,326	+				-0.4
3,429,394	+		Psyr_2858	0.13	-0.5
3,429,394	+		Psyr_2858	0.13	+0.0
3,429,395	-		Psyr_2858	0.14	+0.6
3,429,395	-		Psyr_2858	0.14	-1.2
3,429,550	+		Psyr_2858	0.29	+0.3
3,429,581	+		Psyr_2858	0.32	-2.0
3,429,582	-		Psyr_2858	0.32	-0.8
3,429,582	-		Psyr_2858	0.32	-0.2
3,429,586	-		Psyr_2858	0.32	-1.2
3,429,586	-		Psyr_2858	0.32	-1.5
3,429,586	-		Psyr_2858	0.32	-0.0
3,429,586	-		Psyr_2858	0.32	+2.7
3,429,586	-		Psyr_2858	0.32	+0.6
3,429,660	+		Psyr_2858	0.40	-0.2