Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_1794

Experiment: KB with Ampicillin 15.6 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Ampicillin 15.6 ug/ml
2,057,406	+		Psyr_1793	0.76	+0.7
2,057,423	-		Psyr_1793	0.77	-0.7
2,057,719	+		Psyr_1793	0.84	+0.3
2,057,720	-		Psyr_1793	0.84	+1.5
2,057,762	-		Psyr_1793	0.85	-0.3
2,057,833	+		Psyr_1793	0.87	+0.7
2,058,064	+				-1.0
2,058,097	+				-0.3
2,058,109	+				-0.2
2,058,109	+				+0.3
2,058,269	+				+0.8
2,058,439	+				-1.7
2,058,481	+				-1.3
2,058,482	-				-0.2
2,058,766	-				+0.4
2,058,766	-				-1.7
2,058,852	+				+0.2
2,058,852	+				-0.3
2,058,853	-				-0.3
2,058,853	-				+0.2
2,058,853	-				-0.3
2,059,283	+				+0.8
2,059,283	+				-0.5
2,059,434	+		Psyr_1794	0.12	+1.7
2,059,588	-		Psyr_1794	0.13	+0.0
2,059,658	+		Psyr_1794	0.14	+0.9
2,059,659	-		Psyr_1794	0.14	-0.2
2,059,659	-		Psyr_1794	0.14	+1.3
2,060,277	+		Psyr_1794	0.21	-0.2
2,060,949	+		Psyr_1794	0.28	-0.3
2,060,965	-		Psyr_1794	0.28	+0.7
2,061,369	+		Psyr_1794	0.33	+0.4
2,061,381	+		Psyr_1794	0.33	+1.0
2,061,382	-		Psyr_1794	0.33	-0.4
2,061,990	+		Psyr_1794	0.39	-0.3
2,061,990	+		Psyr_1794	0.39	+1.2
2,061,990	+		Psyr_1794	0.39	+0.6
2,061,990	+		Psyr_1794	0.39	+3.0
2,061,991	-		Psyr_1794	0.39	+0.9
2,061,991	-		Psyr_1794	0.39	+0.7
2,061,991	-		Psyr_1794	0.39	+0.4
2,061,991	-		Psyr_1794	0.39	-0.3
2,062,236	+		Psyr_1794	0.42	+0.8
2,062,236	+		Psyr_1794	0.42	+0.3
2,062,236	+		Psyr_1794	0.42	-0.5
2,062,236	+		Psyr_1794	0.42	-0.3
2,062,236	+		Psyr_1794	0.42	+0.7
2,062,236	+		Psyr_1794	0.42	+0.8
2,062,237	-		Psyr_1794	0.42	+1.2
2,062,345	+		Psyr_1794	0.43	-0.1
2,062,623	+		Psyr_1794	0.46	+0.5
2,062,624	-		Psyr_1794	0.46	-0.0
2,062,965	-		Psyr_1794	0.50	+0.9
2,063,215	-		Psyr_1794	0.53	+0.9
2,063,532	+		Psyr_1794	0.56	+0.7
2,063,533	-		Psyr_1794	0.56	+0.7
2,063,533	-		Psyr_1794	0.56	+0.0
2,063,686	-		Psyr_1794	0.58	+0.4
2,063,686	-		Psyr_1794	0.58	-1.1
2,063,686	-		Psyr_1794	0.58	-1.8
2,064,046	+		Psyr_1794	0.62	+1.4
2,064,091	-		Psyr_1794	0.62	+0.1
2,064,091	-		Psyr_1794	0.62	-0.8
2,064,091	-		Psyr_1794	0.62	+0.7
2,064,145	-		Psyr_1794	0.63	+0.1
2,064,228	+		Psyr_1794	0.64	-0.1
2,064,228	+		Psyr_1794	0.64	+0.7
2,064,228	+		Psyr_1794	0.64	+0.1
2,064,228	+		Psyr_1794	0.64	-0.9
2,064,466	+		Psyr_1794	0.66	-0.5
2,064,483	+		Psyr_1794	0.66	-0.8
2,064,483	+		Psyr_1794	0.66	+0.9
2,064,484	-		Psyr_1794	0.67	-0.7
2,065,056	+		Psyr_1794	0.73	+0.5
2,065,447	+		Psyr_1794	0.77	+0.1
2,065,447	+		Psyr_1794	0.77	+1.7
2,065,447	+		Psyr_1794	0.77	+0.1
2,065,447	+		Psyr_1794	0.77	+1.3
2,065,447	+		Psyr_1794	0.77	+0.3
2,065,447	+		Psyr_1794	0.77	-0.2
2,065,448	-		Psyr_1794	0.77	-1.5
2,065,448	-		Psyr_1794	0.77	-0.7
2,065,448	-		Psyr_1794	0.77	-0.3
2,066,619	+		Psyr_1794	0.90	+2.1
2,066,619	+		Psyr_1794	0.90	+0.9
2,066,619	+		Psyr_1794	0.90	-0.2
2,066,620	-		Psyr_1794	0.90	+0.2
2,066,620	-		Psyr_1794	0.90	+1.7
2,066,844	+				-0.0
2,066,844	+				-0.1
2,066,994	+				-0.2
2,066,994	+				-2.1
2,066,994	+				+0.9
2,066,995	-				+0.4
2,067,123	+				-0.7
2,067,123	+				-1.0
2,067,123	+				-0.3
2,067,123	+				+1.2
2,067,124	-				+0.4
2,067,305	+				+0.7
2,067,685	+				+0.2
2,067,686	-				+1.7
2,067,686	-				+1.3
2,067,686	-				+1.4
2,068,007	-		Psyr_1795	0.40	+0.1
2,068,059	+		Psyr_1795	0.46	-0.1
2,068,059	+		Psyr_1795	0.46	+2.2
2,068,059	+		Psyr_1795	0.46	+0.4
2,068,060	-		Psyr_1795	0.46	-0.2
2,068,060	-		Psyr_1795	0.46	-0.7
2,068,060	-		Psyr_1795	0.46	-1.2
2,068,060	-		Psyr_1795	0.46	-0.3
2,068,352	+		Psyr_1795	0.80	-1.0
2,068,352	+		Psyr_1795	0.80	+0.1
2,068,353	-		Psyr_1795	0.80	-0.2
2,068,467	+				+0.9
2,068,468	-				-0.4
2,068,468	-				-0.6
2,068,468	-				-0.0