Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_1733
Experiment: KB with Ampicillin 15.6 ug/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | KB with Ampicillin 15.6 ug/ml |
---|---|---|---|---|---|
remove | |||||
1,967,116 | - | +0.7 | |||
1,968,444 | - | Psyr_1733 | 0.78 | -0.6 | |
1,968,462 | - | Psyr_1733 | 0.81 | -1.5 | |
1,968,462 | - | Psyr_1733 | 0.81 | -0.9 | |
1,968,545 | - | -1.3 | |||
1,968,545 | - | +1.3 | |||
1,968,545 | - | +1.2 | |||
1,968,545 | - | -0.5 | |||
1,968,550 | - | -0.3 | |||
1,968,550 | - | -0.1 | |||
1,968,573 | - | +0.3 | |||
1,968,596 | - | -0.6 | |||
1,968,667 | - | +0.7 | |||
1,968,707 | + | -2.3 |
Or see this region's nucleotide sequence