Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_1596

Experiment: KB with Ampicillin 15.6 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Ampicillin 15.6 ug/ml
1,794,092	+				+0.5
1,794,092	+				+0.4
1,794,093	-				+1.2
1,794,093	-				-0.3
1,794,093	-				+2.7
1,794,093	-				+1.6
1,794,152	+				-0.1
1,794,152	+				-0.5
1,794,152	+				+0.6
1,794,152	+				+0.8
1,794,199	+				-0.3
1,794,199	+				+1.0
1,794,199	+				-0.1
1,794,199	+				-1.2
1,794,199	+				+0.3
1,794,199	+				+1.3
1,794,200	-				+1.1
1,794,200	-				-0.3
1,794,249	+				+0.6
1,794,249	+				+1.0
1,794,250	-				-0.3
1,794,376	+				-0.8
1,794,376	+				+1.1
1,794,376	+				+0.3
1,794,377	-				-0.7
1,794,428	+				+0.4
1,794,574	+		Psyr_1595	0.25	+0.2
1,794,574	+		Psyr_1595	0.25	+1.4
1,794,575	-		Psyr_1595	0.25	+0.1
1,794,698	+		Psyr_1595	0.52	-1.1
1,794,698	+		Psyr_1595	0.52	+0.3
1,794,698	+		Psyr_1595	0.52	+0.1
1,794,698	+		Psyr_1595	0.52	+0.2
1,794,699	-		Psyr_1595	0.53	-3.0
1,794,699	-		Psyr_1595	0.53	+0.7
1,794,699	-		Psyr_1595	0.53	-1.4
1,794,699	-		Psyr_1595	0.53	-1.8
1,794,699	-		Psyr_1595	0.53	-0.3
1,794,699	-		Psyr_1595	0.53	+0.2
1,794,911	+				-0.3
1,794,911	+				-0.3
1,794,911	+				-0.5
1,794,911	+				+1.1
1,794,911	+				+0.2
1,794,911	+				-1.7
1,794,911	+				+0.2
1,794,911	+				-0.6
1,794,911	+				-0.1
1,794,911	+				+0.2
1,794,911	+				+0.2
1,794,911	+				+0.4
1,794,912	-				+0.7
1,794,912	-				+1.4
1,794,912	-				+0.7
1,794,912	-				-0.6
1,794,912	-				+1.3
1,794,912	-				+1.7
1,794,912	-				-0.4
1,794,912	-				+0.7
1,794,952	+				+0.6
1,794,953	-				+0.3
1,794,965	+				+0.0
1,794,998	-				+1.5
1,794,998	-				-0.8
1,795,000	+				-0.5
1,795,000	+				+0.0
1,795,000	+				+0.4
1,795,000	+				-1.8
1,795,000	+				+1.2
1,795,000	+				-1.3
1,795,001	-				-1.0
1,795,001	-				+0.5
1,795,001	-				-1.3
1,795,001	-				+0.1
1,795,001	-				+0.4
1,795,053	+		Psyr_1596	0.12	-0.8
1,795,077	+		Psyr_1596	0.19	-1.1
1,795,077	+		Psyr_1596	0.19	+0.1
1,795,078	-		Psyr_1596	0.19	-0.2
1,795,433	+		Psyr_1597	0.21	+0.4
1,795,691	+				+0.2
1,795,691	+				+0.2
1,795,691	+				-0.9
1,795,692	-				+1.3
1,795,692	-				+0.9
1,795,692	-				+0.6
1,795,692	-				-0.3
1,795,692	-				+0.9
1,796,172	-		Psyr_1598	0.24	+0.3
1,796,177	+		Psyr_1598	0.24	+0.2
1,796,177	+		Psyr_1598	0.24	+0.0
1,796,178	-		Psyr_1598	0.24	+0.4
1,796,178	-		Psyr_1598	0.24	-0.3
1,796,178	-		Psyr_1598	0.24	-0.0
1,796,178	-		Psyr_1598	0.24	-0.5
1,796,216	+		Psyr_1598	0.27	-0.7
1,796,217	-		Psyr_1598	0.27	-0.7
1,796,309	+		Psyr_1598	0.32	-1.8