Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_1325

Experiment: acetate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate (C)
1,514,381	-		Pf1N1B4_1323	0.76	+0.4
1,514,451	+		Pf1N1B4_1323	0.80	+1.7
1,514,451	+		Pf1N1B4_1323	0.80	-0.6
1,514,452	-		Pf1N1B4_1323	0.80	+0.7
1,514,462	+		Pf1N1B4_1323	0.80	-1.3
1,514,462	+		Pf1N1B4_1323	0.80	+0.8
1,514,462	+		Pf1N1B4_1323	0.80	-0.4
1,514,462	+				-0.2
1,514,462	+		Pf1N1B4_1323	0.80	-0.8
1,514,462	+		Pf1N1B4_1323	0.80	-0.2
1,514,462	+		Pf1N1B4_1323	0.80	-1.3
1,514,462	+		Pf1N1B4_1323	0.80	-0.3
1,514,463	-		Pf1N1B4_1323	0.80	-0.6
1,514,463	-		Pf1N1B4_1323	0.80	+1.4
1,514,463	-		Pf1N1B4_1323	0.80	-0.9
1,514,463	-		Pf1N1B4_1323	0.80	+0.4
1,514,463	-		Pf1N1B4_1323	0.80	+0.4
1,514,463	-		Pf1N1B4_1323	0.80	+0.1
1,514,463	-		Pf1N1B4_1323	0.80	-0.6
1,514,463	-		Pf1N1B4_1323	0.80	+0.5
1,514,463	-		Pf1N1B4_1323	0.80	-0.1
1,514,463	-		Pf1N1B4_1323	0.80	-0.4
1,514,463	-		Pf1N1B4_1323	0.80	-0.0
1,514,463	-		Pf1N1B4_1323	0.80	-0.2
1,514,463	-		Pf1N1B4_1323	0.80	-0.6
1,514,463	-		Pf1N1B4_1323	0.80	+1.2
1,514,703	+				+0.9
1,514,703	+				+0.7
1,514,704	-				+0.8
1,514,704	-				-0.4
1,514,714	+				+0.4
1,514,823	+				+0.8
1,514,823	+				+0.6
1,514,823	+				-1.1
1,514,823	+				-0.5
1,514,823	+				+0.5
1,514,831	+				+0.2
1,514,831	+				-1.1
1,514,831	+				-0.2
1,514,831	+				+0.7
1,514,831	+				-0.2
1,514,832	-				-1.4
1,514,832	-				+0.4
1,514,832	-				+0.1
1,514,832	-				+1.2
1,514,832	-				+0.1
1,514,925	-		Pf1N1B4_1324	0.20	-0.6
1,515,004	-		Pf1N1B4_1324	0.34	-2.9
1,515,007	+		Pf1N1B4_1324	0.34	+0.8
1,515,007	+		Pf1N1B4_1324	0.34	+0.4
1,515,007	+		Pf1N1B4_1324	0.34	-0.2
1,515,007	+		Pf1N1B4_1324	0.34	-0.8
1,515,008	-		Pf1N1B4_1324	0.34	+0.8
1,515,008	-		Pf1N1B4_1324	0.34	+0.4
1,515,008	-		Pf1N1B4_1324	0.34	+0.8
1,515,008	-		Pf1N1B4_1324	0.34	-2.1
1,515,014	-		Pf1N1B4_1324	0.35	+0.2
1,515,020	-		Pf1N1B4_1324	0.36	-0.3
1,515,080	+		Pf1N1B4_1324	0.47	-0.4
1,515,082	+		Pf1N1B4_1324	0.47	+0.1
1,515,082	+		Pf1N1B4_1324	0.47	+0.4
1,515,082	+		Pf1N1B4_1324	0.47	+0.7
1,515,082	+		Pf1N1B4_1324	0.47	+0.4
1,515,082	+		Pf1N1B4_1324	0.47	-0.1
1,515,082	+				-1.2
1,515,083	-		Pf1N1B4_1324	0.47	-0.5
1,515,083	-		Pf1N1B4_1324	0.47	-1.3
1,515,083	-		Pf1N1B4_1324	0.47	+0.1
1,515,083	-		Pf1N1B4_1324	0.47	-0.2
1,515,083	-		Pf1N1B4_1324	0.47	+0.6
1,515,110	-		Pf1N1B4_1324	0.52	+0.4
1,515,110	-		Pf1N1B4_1324	0.52	-0.2
1,515,122	+		Pf1N1B4_1324	0.54	+0.4
1,515,122	+		Pf1N1B4_1324	0.54	+0.1
1,515,122	+		Pf1N1B4_1324	0.54	-0.6
1,515,122	+		Pf1N1B4_1324	0.54	+0.1
1,515,122	+		Pf1N1B4_1324	0.54	-1.8
1,515,123	-		Pf1N1B4_1324	0.54	+0.5
1,515,123	-		Pf1N1B4_1324	0.54	+0.4
1,515,123	-		Pf1N1B4_1324	0.54	+1.1
1,515,123	-		Pf1N1B4_1324	0.54	-0.1
1,515,124	+		Pf1N1B4_1324	0.54	+1.2
1,515,125	-		Pf1N1B4_1324	0.55	-0.6
1,515,160	+		Pf1N1B4_1324	0.61	-0.6
1,515,160	+		Pf1N1B4_1324	0.61	+1.4
1,515,177	-		Pf1N1B4_1324	0.64	+0.0
1,515,178	+		Pf1N1B4_1324	0.64	-0.3
1,515,178	+		Pf1N1B4_1324	0.64	-1.4
1,515,179	-		Pf1N1B4_1324	0.64	-1.3
1,515,210	+		Pf1N1B4_1324	0.69	-0.5
1,515,210	+		Pf1N1B4_1324	0.69	-0.0
1,515,380	+				-0.9
1,515,381	-				+0.8
1,515,539	+				-0.6
1,515,539	+				+0.6
1,515,540	-				+0.4
1,515,540	-				+2.0
1,515,659	+				-0.2
1,515,659	+				-0.6
1,515,659	+				+0.8
1,515,660	-				+1.8
1,515,660	-				-1.2
1,515,660	-				-0.2
1,515,660	-				+0.4
1,515,677	+				+0.4
1,515,677	+				-1.2
1,515,677	+				-0.9
1,515,678	-				+0.4
1,515,678	-				+0.1
1,515,785	+				-0.4
1,515,785	+				-0.6
1,515,785	+				-0.4
1,515,786	-				+1.4
1,515,786	-				+0.4
1,515,786	-				+0.4
1,515,786	-				-0.5
1,515,786	-				+0.4
1,516,226	+		Pf1N1B4_1325	0.19	-1.9
1,516,227	-		Pf1N1B4_1325	0.19	+0.1
1,516,322	+		Pf1N1B4_1325	0.21	-0.5
1,516,323	-		Pf1N1B4_1325	0.21	+0.2
1,516,323	-		Pf1N1B4_1325	0.21	+2.0
1,516,323	-		Pf1N1B4_1325	0.21	-1.3
1,516,323	-		Pf1N1B4_1325	0.21	-0.3
1,516,463	-		Pf1N1B4_1325	0.24	-1.0
1,516,463	-		Pf1N1B4_1325	0.24	+0.7
1,516,463	-		Pf1N1B4_1325	0.24	-0.1
1,516,509	-		Pf1N1B4_1325	0.25	-0.6
1,516,509	-		Pf1N1B4_1325	0.25	-0.1
1,516,509	-		Pf1N1B4_1325	0.25	-2.1
1,516,509	-		Pf1N1B4_1325	0.25	+0.7
1,516,517	+		Pf1N1B4_1325	0.26	+0.2
1,516,517	+		Pf1N1B4_1325	0.26	-0.4
1,516,517	+		Pf1N1B4_1325	0.26	+0.4
1,516,517	+		Pf1N1B4_1325	0.26	+0.2
1,516,518	-		Pf1N1B4_1325	0.26	+0.6
1,516,518	-		Pf1N1B4_1325	0.26	-1.2
1,516,518	-		Pf1N1B4_1325	0.26	+0.5
1,516,518	-		Pf1N1B4_1325	0.26	-0.8
1,516,518	-		Pf1N1B4_1325	0.26	-1.6
1,516,518	-		Pf1N1B4_1325	0.26	-0.2
1,516,518	-		Pf1N1B4_1325	0.26	+1.0
1,516,518	-		Pf1N1B4_1325	0.26	-0.6
1,516,595	-		Pf1N1B4_1325	0.27	-0.6
1,516,595	-		Pf1N1B4_1325	0.27	+0.7
1,516,595	-		Pf1N1B4_1325	0.27	-1.6
1,516,595	-		Pf1N1B4_1325	0.27	+3.7
1,516,595	-		Pf1N1B4_1325	0.27	-0.0
1,516,595	-		Pf1N1B4_1325	0.27	+1.4
1,516,595	-		Pf1N1B4_1325	0.27	+0.5
1,516,627	-		Pf1N1B4_1325	0.28	-1.3
1,516,671	+		Pf1N1B4_1325	0.29	-0.9
1,516,703	+		Pf1N1B4_1325	0.30	-0.4
1,516,704	-		Pf1N1B4_1325	0.30	+0.4
1,516,725	+		Pf1N1B4_1325	0.30	-0.0
1,516,725	+		Pf1N1B4_1325	0.30	+0.0
1,516,725	+		Pf1N1B4_1325	0.30	-0.2
1,516,726	-		Pf1N1B4_1325	0.30	+1.8
1,516,748	-		Pf1N1B4_1325	0.31	-1.2
1,516,832	-		Pf1N1B4_1325	0.33	+0.8
1,516,832	-		Pf1N1B4_1325	0.33	-0.2
1,516,832	-		Pf1N1B4_1325	0.33	+0.2
1,516,944	+		Pf1N1B4_1325	0.35	-1.8
1,517,231	+		Pf1N1B4_1325	0.42	-1.4
1,517,231	+		Pf1N1B4_1325	0.42	+1.0
1,517,231	+		Pf1N1B4_1325	0.42	-1.8
1,517,231	+		Pf1N1B4_1325	0.42	-0.8
1,517,231	+		Pf1N1B4_1325	0.42	+0.4
1,517,232	-		Pf1N1B4_1325	0.42	+0.2
1,517,232	-		Pf1N1B4_1325	0.42	-1.3
1,517,240	+		Pf1N1B4_1325	0.42	+0.4
1,517,240	+		Pf1N1B4_1325	0.42	+1.7
1,517,240	+		Pf1N1B4_1325	0.42	-0.3
1,517,241	-		Pf1N1B4_1325	0.42	-2.1
1,517,241	-		Pf1N1B4_1325	0.42	-1.9
1,517,241	-		Pf1N1B4_1325	0.42	-1.6
1,517,310	+		Pf1N1B4_1325	0.43	+0.3
1,517,469	-		Pf1N1B4_1325	0.47	+0.0
1,517,469	-		Pf1N1B4_1325	0.47	-0.3
1,517,557	+		Pf1N1B4_1325	0.49	+0.4
1,517,558	-		Pf1N1B4_1325	0.49	+0.1
1,517,838	-		Pf1N1B4_1325	0.55	+0.5
1,517,879	-		Pf1N1B4_1325	0.56	-1.9
1,517,948	-		Pf1N1B4_1325	0.58	-0.6
1,518,049	-		Pf1N1B4_1325	0.60	+0.0
1,518,145	+		Pf1N1B4_1325	0.62	-0.8
1,518,180	+		Pf1N1B4_1325	0.63	-2.6
1,518,302	+		Pf1N1B4_1325	0.65	-0.8
1,518,367	-		Pf1N1B4_1325	0.67	+0.7
1,518,507	+		Pf1N1B4_1325	0.70	+0.5
1,518,508	-		Pf1N1B4_1325	0.70	-0.4
1,518,524	+		Pf1N1B4_1325	0.70	+0.2
1,518,566	+		Pf1N1B4_1325	0.71	-0.6
1,518,566	+		Pf1N1B4_1325	0.71	-0.8
1,518,566	+		Pf1N1B4_1325	0.71	+0.1
1,518,566	+		Pf1N1B4_1325	0.71	+0.1
1,518,566	+		Pf1N1B4_1325	0.71	-0.2
1,518,566	+		Pf1N1B4_1325	0.71	-0.7
1,518,566	+		Pf1N1B4_1325	0.71	+0.2
1,518,567	-		Pf1N1B4_1325	0.71	-0.9
1,518,567	-		Pf1N1B4_1325	0.71	-0.7
1,518,567	-		Pf1N1B4_1325	0.71	+1.7
1,518,567	-		Pf1N1B4_1325	0.71	-0.5
1,518,567	-		Pf1N1B4_1325	0.71	-0.6
1,518,605	+		Pf1N1B4_1325	0.72	-0.1
1,518,605	+		Pf1N1B4_1325	0.72	-0.8
1,518,605	+		Pf1N1B4_1325	0.72	-0.1
1,518,605	+		Pf1N1B4_1325	0.72	+0.4
1,518,605	+		Pf1N1B4_1325	0.72	-1.2
1,518,605	+		Pf1N1B4_1325	0.72	-1.2
1,518,605	+		Pf1N1B4_1325	0.72	-0.0
1,518,605	+		Pf1N1B4_1325	0.72	-2.1
1,518,606	-		Pf1N1B4_1325	0.72	-0.6
1,518,606	-		Pf1N1B4_1325	0.72	-1.6
1,518,606	-		Pf1N1B4_1325	0.72	+0.4
1,518,606	-		Pf1N1B4_1325	0.72	+1.4
1,518,606	-		Pf1N1B4_1325	0.72	+1.4
1,518,606	-		Pf1N1B4_1325	0.72	+0.7
1,518,608	+		Pf1N1B4_1325	0.72	-0.6
1,518,608	+		Pf1N1B4_1325	0.72	-0.2
1,518,608	+		Pf1N1B4_1325	0.72	-1.1
1,518,609	-		Pf1N1B4_1325	0.72	-0.9
1,518,609	-		Pf1N1B4_1325	0.72	-2.0
1,518,609	-		Pf1N1B4_1325	0.72	+2.4
1,518,609	-		Pf1N1B4_1325	0.72	-0.9
1,518,778	+		Pf1N1B4_1325	0.76	-0.1
1,518,785	+		Pf1N1B4_1325	0.76	-0.5
1,518,785	+		Pf1N1B4_1325	0.76	+0.4
1,519,004	+		Pf1N1B4_1325	0.81	-0.2
1,519,004	+		Pf1N1B4_1325	0.81	-1.1
1,519,004	+		Pf1N1B4_1325	0.81	+0.1
1,519,004	+		Pf1N1B4_1325	0.81	-0.9
1,519,004	+		Pf1N1B4_1325	0.81	-0.5
1,519,004	+		Pf1N1B4_1325	0.81	-0.3
1,519,005	-		Pf1N1B4_1325	0.81	+0.4
1,519,005	-		Pf1N1B4_1325	0.81	-1.1
1,519,005	-		Pf1N1B4_1325	0.81	+2.1
1,519,005	-		Pf1N1B4_1325	0.81	-0.2
1,519,005	-		Pf1N1B4_1325	0.81	+0.6
1,519,166	+		Pf1N1B4_1325	0.85	-1.8
1,519,253	+		Pf1N1B4_1325	0.87	-0.2
1,519,253	+		Pf1N1B4_1325	0.87	-1.1
1,519,254	-		Pf1N1B4_1325	0.87	-0.2
1,519,254	-		Pf1N1B4_1325	0.87	+1.1
1,519,254	-		Pf1N1B4_1325	0.87	-0.3
1,519,268	+		Pf1N1B4_1325	0.87	+1.0
1,519,268	+		Pf1N1B4_1325	0.87	+1.4
1,519,335	+		Pf1N1B4_1325	0.89	+1.7
1,519,335	+		Pf1N1B4_1325	0.89	+0.1
1,519,385	+		Pf1N1B4_1325	0.90	+0.4
1,519,400	-		Pf1N1B4_1325	0.90	+0.1
1,519,400	-		Pf1N1B4_1325	0.90	+0.4
1,519,592	+				-0.8
1,519,593	-				+1.1
1,519,593	-				+0.1
1,519,635	-				+0.2
1,519,635	-				-0.2
1,519,673	+				-1.4
1,519,673	+				+0.1
1,519,674	-				+0.2
1,519,674	-				+2.4
1,519,674	-				+0.1
1,519,674	-				-0.6
1,519,674	-				+0.1
1,519,805	+				-1.6
1,519,805	+				+0.4
1,519,806	-				+0.7
1,519,806	-				+0.3
1,519,806	-				-0.3
1,519,806	-				-1.4
1,519,849	-				+3.4
1,519,849	-				-0.9
1,519,962	+				-0.9
1,519,963	-				+0.1
1,519,995	-				-1.6
1,519,995	-				+1.2
1,520,130	-				+0.4
1,520,203	+				-0.6
1,520,254	+				-0.2
1,520,318	+				+1.0
1,520,318	+				+0.2
1,520,319	-				+1.4
1,520,380	-				-0.2
1,520,424	+				-0.3
1,520,502	+				-0.6
1,520,762	+				+0.3
1,520,762	+				+0.1
1,520,762	+				+1.4
1,520,763	-				+1.7
1,520,763	-				-1.4
1,520,763	-				+0.7
1,520,763	-				-0.2
1,520,763	-				-0.7