Strain Fitness in Caulobacter crescentus NA1000 around CCNA_03409

Experiment: L-Alanine (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Alanine (C)
3,575,777	-				+2.1
3,575,777	-				-1.3
3,575,777	-				-2.6
3,575,783	+				-0.0
3,575,783	+				+0.2
3,575,788	+				-0.2
3,575,791	-				-0.7
3,575,791	-				-0.5
3,575,791	-				-0.3
3,575,796	-				+0.6
3,575,805	+				+1.2
3,575,816	-				+2.0
3,575,816	-				-1.0
3,575,842	-				+0.6
3,575,843	-				+0.8
3,575,900	+		CCNA_03408	0.13	+2.4
3,575,919	-		CCNA_03408	0.15	-0.1
3,575,975	-		CCNA_03408	0.21	+1.3
3,576,072	+		CCNA_03408	0.31	-0.5
3,576,087	+		CCNA_03408	0.33	+0.3
3,576,125	-		CCNA_03408	0.37	-1.5
3,576,137	+		CCNA_03408	0.38	-1.5
3,576,145	-		CCNA_03408	0.39	+0.8
3,576,211	+		CCNA_03408	0.46	+1.8
3,576,227	+		CCNA_03408	0.48	+3.7
3,576,235	-		CCNA_03408	0.49	-0.6
3,576,246	+		CCNA_03408	0.50	-3.8
3,576,246	+		CCNA_03408	0.50	+1.2
3,576,282	-		CCNA_03408	0.54	-1.2
3,576,290	+		CCNA_03408	0.55	-0.1
3,576,290	+		CCNA_03408	0.55	-1.4
3,576,298	-		CCNA_03408	0.56	-1.4
3,576,307	+		CCNA_03408	0.57	+2.1
3,576,315	-		CCNA_03408	0.58	+0.6
3,576,315	-		CCNA_03408	0.58	+0.2
3,576,334	+		CCNA_03408	0.60	+2.1
3,576,334	+		CCNA_03408	0.60	-0.6
3,576,342	-		CCNA_03408	0.61	-2.9
3,576,342	-		CCNA_03408	0.61	-1.6
3,576,348	-		CCNA_03408	0.61	+0.5
3,576,359	+		CCNA_03408	0.63	+0.2
3,576,383	+		CCNA_03408	0.65	+0.7
3,576,397	+		CCNA_03408	0.67	+1.2
3,576,405	-		CCNA_03408	0.68	+0.6
3,576,440	+		CCNA_03408	0.71	+0.8
3,576,489	+		CCNA_03408	0.77	-0.1
3,576,489	+		CCNA_03408	0.77	-1.7
3,576,516	-		CCNA_03408	0.80	+1.0
3,576,520	+		CCNA_03408	0.80	+0.5
3,576,520	+		CCNA_03408	0.80	+1.1
3,576,525	+		CCNA_03408	0.81	+1.0
3,576,525	+		CCNA_03408	0.81	+0.2
3,576,538	-		CCNA_03408	0.82	+2.1
3,576,552	+		CCNA_03408	0.84	-0.8
3,576,564	+		CCNA_03408	0.85	+1.0
3,576,586	+		CCNA_03408	0.87	-2.0
3,576,602	+		CCNA_03408	0.89	+2.9
3,576,610	-		CCNA_03408	0.90	-1.6
3,576,645	+				-0.8
3,576,647	+				+3.4
3,576,647	+				-1.1
3,576,647	+				+1.6
3,576,647	+				+1.9
3,576,655	-				-2.3
3,576,655	-				-0.5
3,576,655	-				+0.2
3,576,667	-				+1.7
3,576,669	+				-0.6
3,576,677	-				+0.2
3,576,678	+				+1.7
3,576,686	-				+2.2
3,576,686	-				+0.2
3,576,692	+				+0.8
3,576,707	-				+0.6
3,576,778	-				+0.1
3,576,795	+				+0.2
3,576,851	+		CCNA_03409	0.12	-0.8
3,576,851	+		CCNA_03409	0.12	+1.2
3,576,851	+		CCNA_03409	0.12	+1.4
3,576,851	+		CCNA_03409	0.12	-0.0
3,576,851	+		CCNA_03409	0.12	+0.4
3,576,851	+		CCNA_03409	0.12	-0.9
3,576,851	+		CCNA_03409	0.12	+2.6
3,576,854	-		CCNA_03409	0.12	+0.0
3,576,859	-		CCNA_03409	0.12	-0.1
3,576,859	-		CCNA_03409	0.12	+0.2
3,576,859	-		CCNA_03409	0.12	-1.8
3,576,859	-		CCNA_03409	0.12	+1.0
3,576,859	-		CCNA_03409	0.12	-1.5
3,576,859	-		CCNA_03409	0.12	+1.0
3,576,876	-		CCNA_03409	0.14	+1.6
3,576,888	+				+0.6
3,576,898	+		CCNA_03409	0.17	+1.3
3,576,906	-		CCNA_03409	0.17	+2.6
3,576,924	-		CCNA_03409	0.19	-1.6
3,576,929	-		CCNA_03409	0.20	+2.1
3,576,951	-		CCNA_03409	0.22	-0.4
3,576,976	+		CCNA_03409	0.25	+1.8
3,576,984	-		CCNA_03409	0.25	-1.9
3,576,986	-		CCNA_03409	0.26	+0.1
3,576,997	+		CCNA_03409	0.27	+1.4
3,577,022	+		CCNA_03409	0.29	+0.9
3,577,044	+		CCNA_03409	0.32	+0.9
3,577,121	-		CCNA_03409	0.40	+1.2
3,577,126	-		CCNA_03409	0.40	+3.9
3,577,144	-		CCNA_03409	0.42	+2.5
3,577,170	+		CCNA_03409	0.45	+1.0
3,577,170	+		CCNA_03409	0.45	-0.3
3,577,170	+		CCNA_03409	0.45	+2.9
3,577,177	-		CCNA_03409	0.46	+1.1
3,577,178	-		CCNA_03409	0.46	-0.5
3,577,178	-		CCNA_03409	0.46	+2.2
3,577,181	+		CCNA_03409	0.46	+0.9
3,577,189	-		CCNA_03409	0.47	-2.9
3,577,206	+		CCNA_03409	0.49	+1.2
3,577,221	+		CCNA_03409	0.50	+2.5
3,577,226	+		CCNA_03409	0.51	-0.3
3,577,227	+		CCNA_03409	0.51	+0.3
3,577,239	-		CCNA_03409	0.52	+1.4
3,577,272	-		CCNA_03409	0.56	+1.4
3,577,279	+		CCNA_03409	0.56	-1.3
3,577,287	-		CCNA_03409	0.57	+1.3
3,577,313	+		CCNA_03409	0.60	+0.8
3,577,375	-		CCNA_03409	0.66	-1.6
3,577,378	+		CCNA_03409	0.67	-1.0
3,577,385	+		CCNA_03409	0.67	+1.4
3,577,386	-		CCNA_03409	0.68	-3.0
3,577,392	-		CCNA_03409	0.68	+1.8
3,577,392	-		CCNA_03409	0.68	+2.1
3,577,393	-		CCNA_03409	0.68	+0.7
3,577,414	-		CCNA_03409	0.70	+0.2
3,577,414	-				+1.5
3,577,429	-		CCNA_03409	0.72	+1.7
3,577,436	+		CCNA_03409	0.73	+1.6
3,577,442	+		CCNA_03409	0.73	+1.7
3,577,442	+		CCNA_03409	0.73	+1.0
3,577,504	+		CCNA_03409	0.80	+2.4
3,577,550	-		CCNA_03409	0.85	+1.9
3,577,619	+				-2.3
3,577,638	+				-0.4
3,577,659	-				+0.6
3,577,659	-				+0.7
3,577,665	-				+0.6
3,577,666	-				+1.3
3,577,779	-				-1.5
3,577,781	-				+0.6
3,577,781	-				+2.1
3,577,802	+				+2.2
3,577,810	-				+0.6
3,577,838	-				+2.1
3,577,839	-		CCNA_03410	0.10	-1.4
3,577,868	-		CCNA_03410	0.14	-0.5
3,577,904	+		CCNA_03410	0.18	+0.8
3,577,912	-		CCNA_03410	0.19	+1.3
3,577,912	-		CCNA_03410	0.19	-1.9
3,577,912	-		CCNA_03410	0.19	-2.3
3,577,961	-		CCNA_03410	0.25	-1.7
3,577,966	-		CCNA_03410	0.26	-1.4
3,577,975	+		CCNA_03410	0.27	-1.9
3,578,000	+		CCNA_03410	0.30	-1.9
3,578,023	-		CCNA_03410	0.33	-1.1
3,578,050	+		CCNA_03410	0.36	+2.4
3,578,052	+		CCNA_03410	0.36	-1.6
3,578,060	-		CCNA_03410	0.37	+2.2
3,578,060	-		CCNA_03410	0.37	-0.1
3,578,060	-		CCNA_03410	0.37	+1.4
3,578,089	-		CCNA_03410	0.41	+1.2
3,578,130	-		CCNA_03410	0.46	+0.2
3,578,138	+		CCNA_03410	0.47	+0.3
3,578,138	+		CCNA_03410	0.47	-1.1
3,578,138	+		CCNA_03410	0.47	-0.8
3,578,138	+		CCNA_03410	0.47	-1.5
3,578,138	+		CCNA_03410	0.47	-2.0
3,578,146	-		CCNA_03410	0.48	+0.4
3,578,146	-		CCNA_03410	0.48	+1.0
3,578,146	-		CCNA_03410	0.48	-1.3
3,578,177	-		CCNA_03410	0.52	+1.0
3,578,187	-		CCNA_03410	0.53	-0.1
3,578,203	-		CCNA_03410	0.55	+2.5
3,578,246	+		CCNA_03410	0.60	-2.7
3,578,246	+		CCNA_03410	0.60	+0.1
3,578,254	-		CCNA_03410	0.61	-2.7
3,578,254	-		CCNA_03410	0.61	+0.1
3,578,254	-		CCNA_03410	0.61	-0.0
3,578,256	+		CCNA_03410	0.61	+1.4
3,578,259	-		CCNA_03410	0.62	+0.4
3,578,328	-		CCNA_03410	0.70	-3.3
3,578,328	-		CCNA_03410	0.70	+0.2
3,578,362	-		CCNA_03410	0.74	+1.5
3,578,368	-		CCNA_03410	0.75	-1.7
3,578,380	-		CCNA_03410	0.77	+0.6
3,578,387	-		CCNA_03410	0.77	-1.5
3,578,391	+		CCNA_03410	0.78	+0.0
3,578,432	-		CCNA_03410	0.83	-0.6
3,578,518	+				-0.5
3,578,526	-				-1.0
3,578,564	+				+1.7
3,578,572	-				-3.1
3,578,572	-				-2.6
3,578,581	-				-1.0
3,578,608	+				-1.8
3,578,629	+				+0.6
3,578,637	-				+1.0
3,578,649	-				-1.3
3,578,649	-				-1.0
3,578,656	-				+0.7