Experiment: acetate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_10990 and AO356_10995 are separated by 152 nucleotides AO356_10995 and AO356_11000 are separated by 152 nucleotides AO356_11000 and AO356_11005 are separated by 44 nucleotides
AO356_10990: AO356_10990 - 4-hydroxybenzoate octaprenyltransferase, at 2,496,080 to 2,496,970
_10990
AO356_10995: AO356_10995 - hypothetical protein, at 2,497,123 to 2,497,503
_10995
AO356_11000: AO356_11000 - phosphate regulon transcriptional regulatory protein PhoB, at 2,497,656 to 2,498,345
_11000
AO356_11005: AO356_11005 - histidine kinase, at 2,498,390 to 2,499,712
_11005
Position (kb)
2497
2498 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2496.956 kb on + strand at 2496.956 kb on + strand at 2496.956 kb on + strand at 2496.957 kb on - strand at 2496.957 kb on - strand at 2497.140 kb on + strand at 2497.199 kb on + strand, within AO356_10995 at 2497.199 kb on + strand, within AO356_10995 at 2497.199 kb on + strand, within AO356_10995 at 2497.199 kb on + strand, within AO356_10995 at 2497.200 kb on - strand, within AO356_10995 at 2497.200 kb on - strand, within AO356_10995 at 2497.200 kb on - strand, within AO356_10995 at 2497.200 kb on - strand, within AO356_10995 at 2497.200 kb on - strand, within AO356_10995 at 2497.200 kb on - strand, within AO356_10995 at 2497.205 kb on + strand, within AO356_10995 at 2497.205 kb on + strand, within AO356_10995 at 2497.205 kb on + strand, within AO356_10995 at 2497.205 kb on + strand, within AO356_10995 at 2497.205 kb on + strand, within AO356_10995 at 2497.205 kb on + strand, within AO356_10995 at 2497.205 kb on + strand, within AO356_10995 at 2497.206 kb on - strand, within AO356_10995 at 2497.206 kb on - strand, within AO356_10995 at 2497.223 kb on + strand, within AO356_10995 at 2497.223 kb on + strand, within AO356_10995 at 2497.223 kb on + strand, within AO356_10995 at 2497.223 kb on + strand, within AO356_10995 at 2497.224 kb on - strand, within AO356_10995 at 2497.224 kb on - strand, within AO356_10995 at 2497.224 kb on - strand, within AO356_10995 at 2497.224 kb on - strand, within AO356_10995 at 2497.224 kb on - strand, within AO356_10995 at 2497.224 kb on - strand, within AO356_10995 at 2497.224 kb on - strand, within AO356_10995 at 2497.224 kb on - strand, within AO356_10995 at 2497.224 kb on - strand, within AO356_10995 at 2497.224 kb on - strand, within AO356_10995 at 2497.224 kb on - strand, within AO356_10995 at 2497.257 kb on + strand, within AO356_10995 at 2497.287 kb on + strand, within AO356_10995 at 2497.288 kb on - strand, within AO356_10995 at 2497.299 kb on + strand, within AO356_10995 at 2497.299 kb on + strand, within AO356_10995 at 2497.332 kb on + strand, within AO356_10995 at 2497.332 kb on + strand, within AO356_10995 at 2497.332 kb on + strand, within AO356_10995 at 2497.333 kb on - strand, within AO356_10995 at 2497.333 kb on - strand, within AO356_10995 at 2497.370 kb on + strand, within AO356_10995 at 2497.370 kb on + strand, within AO356_10995 at 2497.371 kb on - strand, within AO356_10995 at 2497.371 kb on - strand, within AO356_10995 at 2497.496 kb on + strand at 2497.496 kb on + strand at 2497.496 kb on + strand at 2497.496 kb on + strand at 2497.496 kb on + strand at 2497.496 kb on + strand at 2497.496 kb on + strand at 2497.496 kb on + strand at 2497.496 kb on + strand at 2497.496 kb on + strand at 2497.496 kb on + strand at 2497.497 kb on - strand at 2497.497 kb on - strand at 2497.497 kb on - strand at 2497.497 kb on - strand at 2497.497 kb on - strand at 2497.497 kb on - strand at 2497.497 kb on - strand at 2497.497 kb on - strand at 2497.497 kb on - strand at 2497.497 kb on - strand at 2497.497 kb on - strand at 2497.497 kb on - strand at 2497.497 kb on - strand at 2497.547 kb on + strand at 2497.547 kb on + strand at 2497.548 kb on - strand at 2497.548 kb on - strand at 2497.582 kb on + strand at 2497.582 kb on + strand at 2497.582 kb on + strand at 2497.582 kb on + strand at 2497.582 kb on + strand at 2497.583 kb on - strand at 2497.583 kb on - strand at 2497.583 kb on - strand at 2497.583 kb on - strand at 2497.583 kb on - strand at 2497.602 kb on + strand at 2497.602 kb on + strand at 2497.602 kb on + strand at 2497.602 kb on + strand at 2497.603 kb on - strand at 2497.603 kb on - strand at 2497.611 kb on + strand at 2497.615 kb on + strand at 2497.615 kb on + strand at 2497.615 kb on + strand at 2497.615 kb on + strand at 2497.615 kb on + strand at 2497.615 kb on + strand at 2497.615 kb on + strand at 2497.615 kb on + strand at 2497.615 kb on + strand at 2497.615 kb on + strand at 2497.616 kb on - strand at 2497.616 kb on - strand at 2497.616 kb on - strand at 2497.616 kb on - strand at 2497.616 kb on - strand at 2497.616 kb on - strand at 2497.616 kb on - strand at 2497.616 kb on - strand at 2497.634 kb on + strand at 2497.634 kb on + strand at 2497.634 kb on + strand at 2497.634 kb on + strand at 2497.634 kb on + strand at 2497.634 kb on + strand at 2497.634 kb on + strand at 2497.634 kb on + strand at 2497.634 kb on + strand at 2497.634 kb on + strand at 2497.634 kb on + strand at 2497.634 kb on + strand at 2497.634 kb on + strand at 2497.635 kb on - strand at 2497.635 kb on - strand at 2497.635 kb on - strand at 2497.650 kb on + strand at 2497.650 kb on + strand at 2497.737 kb on + strand, within AO356_11000 at 2497.738 kb on - strand, within AO356_11000 at 2497.841 kb on + strand, within AO356_11000 at 2497.962 kb on + strand, within AO356_11000 at 2497.962 kb on + strand, within AO356_11000 at 2497.963 kb on - strand, within AO356_11000 at 2497.963 kb on - strand, within AO356_11000 at 2497.963 kb on - strand, within AO356_11000 at 2497.963 kb on - strand, within AO356_11000 at 2497.963 kb on - strand, within AO356_11000 at 2497.963 kb on - strand, within AO356_11000 at 2497.963 kb on - strand, within AO356_11000 at 2497.963 kb on - strand, within AO356_11000 at 2497.997 kb on - strand, within AO356_11000 at 2498.136 kb on + strand, within AO356_11000 at 2498.178 kb on + strand, within AO356_11000 at 2498.178 kb on + strand, within AO356_11000 at 2498.178 kb on + strand, within AO356_11000 at 2498.178 kb on + strand, within AO356_11000 at 2498.179 kb on - strand, within AO356_11000 at 2498.179 kb on - strand, within AO356_11000 at 2498.179 kb on - strand, within AO356_11000 at 2498.223 kb on + strand, within AO356_11000 at 2498.223 kb on + strand, within AO356_11000 at 2498.223 kb on + strand, within AO356_11000 at 2498.223 kb on + strand, within AO356_11000 at 2498.224 kb on - strand, within AO356_11000 at 2498.224 kb on - strand, within AO356_11000 at 2498.224 kb on - strand, within AO356_11000 at 2498.224 kb on - strand, within AO356_11000 at 2498.287 kb on - strand at 2498.287 kb on - strand at 2498.287 kb on - strand at 2498.287 kb on - strand at 2498.299 kb on + strand at 2498.300 kb on - strand at 2498.300 kb on - strand at 2498.477 kb on + strand at 2498.477 kb on + strand at 2498.478 kb on - strand at 2498.478 kb on - strand at 2498.478 kb on - strand at 2498.478 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction acetate (C) remove 2,496,956 + +0.5 2,496,956 + -0.8 2,496,956 + +0.4 2,496,957 - -0.1 2,496,957 - -0.0 2,497,140 + -0.2 2,497,199 + AO356_10995 0.20 -2.2 2,497,199 + AO356_10995 0.20 +0.1 2,497,199 + AO356_10995 0.20 +0.0 2,497,199 + AO356_10995 0.20 +1.0 2,497,200 - AO356_10995 0.20 -0.3 2,497,200 - AO356_10995 0.20 +0.1 2,497,200 - AO356_10995 0.20 -1.2 2,497,200 - AO356_10995 0.20 +0.5 2,497,200 - AO356_10995 0.20 +0.3 2,497,200 - AO356_10995 0.20 +0.7 2,497,205 + AO356_10995 0.22 -0.1 2,497,205 + AO356_10995 0.22 +0.2 2,497,205 + AO356_10995 0.22 +1.4 2,497,205 + AO356_10995 0.22 +0.4 2,497,205 + AO356_10995 0.22 +1.7 2,497,205 + AO356_10995 0.22 +1.8 2,497,205 + AO356_10995 0.22 -0.4 2,497,206 - AO356_10995 0.22 +0.1 2,497,206 - AO356_10995 0.22 +0.2 2,497,223 + AO356_10995 0.26 +0.2 2,497,223 + AO356_10995 0.26 -1.1 2,497,223 + AO356_10995 0.26 -0.3 2,497,223 + AO356_10995 0.26 +0.0 2,497,224 - AO356_10995 0.27 -0.0 2,497,224 - AO356_10995 0.27 +1.4 2,497,224 - AO356_10995 0.27 -0.1 2,497,224 - AO356_10995 0.27 -0.0 2,497,224 - AO356_10995 0.27 +0.5 2,497,224 - AO356_10995 0.27 -0.7 2,497,224 - AO356_10995 0.27 -0.7 2,497,224 - AO356_10995 0.27 -0.7 2,497,224 - AO356_10995 0.27 +0.8 2,497,224 - AO356_10995 0.27 +0.9 2,497,224 - AO356_10995 0.27 -0.2 2,497,257 + AO356_10995 0.35 +0.7 2,497,287 + AO356_10995 0.43 -0.9 2,497,288 - AO356_10995 0.43 -0.8 2,497,299 + AO356_10995 0.46 -0.9 2,497,299 + AO356_10995 0.46 -0.2 2,497,332 + AO356_10995 0.55 -0.1 2,497,332 + AO356_10995 0.55 +0.5 2,497,332 + AO356_10995 0.55 +0.1 2,497,333 - AO356_10995 0.55 +0.0 2,497,333 - AO356_10995 0.55 -0.1 2,497,370 + AO356_10995 0.65 +0.7 2,497,370 + AO356_10995 0.65 -0.1 2,497,371 - AO356_10995 0.65 +0.9 2,497,371 - AO356_10995 0.65 +0.9 2,497,496 + +0.9 2,497,496 + +0.4 2,497,496 + +0.0 2,497,496 + +1.1 2,497,496 + +0.8 2,497,496 + +0.9 2,497,496 + -0.4 2,497,496 + -0.1 2,497,496 + -0.3 2,497,496 + -0.2 2,497,496 + +1.0 2,497,497 - +0.0 2,497,497 - -0.4 2,497,497 - +0.2 2,497,497 - +0.1 2,497,497 - +0.1 2,497,497 - +0.0 2,497,497 - +1.8 2,497,497 - -0.3 2,497,497 - +0.6 2,497,497 - -0.4 2,497,497 - -1.1 2,497,497 - -0.5 2,497,497 - +1.4 2,497,547 + -0.5 2,497,547 + +0.7 2,497,548 - -0.2 2,497,548 - -1.5 2,497,582 + +0.0 2,497,582 + -0.1 2,497,582 + +0.9 2,497,582 + +0.6 2,497,582 + -0.9 2,497,583 - -0.7 2,497,583 - +0.3 2,497,583 - -0.1 2,497,583 - -0.2 2,497,583 - +1.0 2,497,602 + -0.9 2,497,602 + -0.6 2,497,602 + -0.6 2,497,602 + +1.2 2,497,603 - +0.5 2,497,603 - +1.1 2,497,611 + +0.6 2,497,615 + -0.3 2,497,615 + +1.0 2,497,615 + -0.7 2,497,615 + +0.2 2,497,615 + +0.7 2,497,615 + -0.4 2,497,615 + +0.1 2,497,615 + +0.5 2,497,615 + -0.0 2,497,615 + +0.1 2,497,616 - +0.5 2,497,616 - +0.9 2,497,616 - +1.1 2,497,616 - +0.2 2,497,616 - +0.6 2,497,616 - +0.1 2,497,616 - +0.8 2,497,616 - +0.4 2,497,634 + +0.4 2,497,634 + +0.0 2,497,634 + +0.8 2,497,634 + -0.3 2,497,634 + +0.1 2,497,634 + +0.4 2,497,634 + +0.4 2,497,634 + +1.0 2,497,634 + +0.8 2,497,634 + +0.2 2,497,634 + -0.1 2,497,634 + -0.5 2,497,634 + +1.3 2,497,635 - +0.6 2,497,635 - +0.5 2,497,635 - +0.3 2,497,650 + +0.6 2,497,650 + +0.1 2,497,737 + AO356_11000 0.12 -0.0 2,497,738 - AO356_11000 0.12 +1.2 2,497,841 + AO356_11000 0.27 -1.1 2,497,962 + AO356_11000 0.44 +1.2 2,497,962 + AO356_11000 0.44 -0.3 2,497,963 - AO356_11000 0.44 -0.0 2,497,963 - AO356_11000 0.44 +0.6 2,497,963 - AO356_11000 0.44 -0.1 2,497,963 - AO356_11000 0.44 -0.1 2,497,963 - AO356_11000 0.44 +0.3 2,497,963 - AO356_11000 0.44 -0.3 2,497,963 - AO356_11000 0.44 +0.4 2,497,963 - AO356_11000 0.44 +0.3 2,497,997 - AO356_11000 0.49 +0.5 2,498,136 + AO356_11000 0.70 +1.1 2,498,178 + AO356_11000 0.76 +0.8 2,498,178 + AO356_11000 0.76 +0.1 2,498,178 + AO356_11000 0.76 +0.5 2,498,178 + AO356_11000 0.76 +0.5 2,498,179 - AO356_11000 0.76 +2.4 2,498,179 - AO356_11000 0.76 +0.5 2,498,179 - AO356_11000 0.76 +0.3 2,498,223 + AO356_11000 0.82 -0.2 2,498,223 + AO356_11000 0.82 +0.2 2,498,223 + AO356_11000 0.82 +0.5 2,498,223 + AO356_11000 0.82 +1.4 2,498,224 - AO356_11000 0.82 +0.6 2,498,224 - AO356_11000 0.82 +0.3 2,498,224 - AO356_11000 0.82 +0.2 2,498,224 - AO356_11000 0.82 -0.3 2,498,287 - +0.1 2,498,287 - +0.2 2,498,287 - -0.2 2,498,287 - +1.0 2,498,299 + -0.1 2,498,300 - -0.4 2,498,300 - +0.2 2,498,477 + -0.3 2,498,477 + -0.6 2,498,478 - -0.1 2,498,478 - -0.4 2,498,478 - -0.5 2,498,478 - -1.1
Or see this region's nucleotide sequence