Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_04470

Experiment: acetate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate (C)
1,011,301	-		AO356_04460	0.64	+0.2
1,011,668	+		AO356_04465	0.28	-0.3
1,011,668	+		AO356_04465	0.28	-0.2
1,011,669	-		AO356_04465	0.29	-0.0
1,011,669	-		AO356_04465	0.29	-0.5
1,011,669	-		AO356_04465	0.29	+0.0
1,011,669	-		AO356_04465	0.29	+0.8
1,011,669	-		AO356_04465	0.29	-1.0
1,011,671	+		AO356_04465	0.29	-0.1
1,011,671	+		AO356_04465	0.29	-0.3
1,011,671	+		AO356_04465	0.29	+0.1
1,011,671	+		AO356_04465	0.29	+0.2
1,011,671	+		AO356_04465	0.29	-0.1
1,011,672	-		AO356_04465	0.29	+0.0
1,011,672	-		AO356_04465	0.29	+0.3
1,011,672	-		AO356_04465	0.29	+0.4
1,011,733	-		AO356_04465	0.38	-0.1
1,011,837	-		AO356_04465	0.52	+0.3
1,011,837	-		AO356_04465	0.52	+0.5
1,012,012	-		AO356_04465	0.77	+0.0
1,012,068	+		AO356_04465	0.85	+1.0
1,012,068	+		AO356_04465	0.85	-0.0
1,012,068	+		AO356_04465	0.85	-0.0
1,012,068	+		AO356_04465	0.85	+0.0
1,012,124	+				-0.5
1,012,124	+				+0.4
1,012,124	+				+0.8
1,012,124	+				-0.1
1,012,125	-				-0.3
1,012,195	+				-0.9
1,012,195	+				+0.3
1,012,196	-				-1.1
1,012,196	-				-0.0
1,012,196	-				+0.8
1,012,196	-				+0.4
1,012,196	-				-0.5
1,012,196	-				+0.4
1,012,196	-				-0.5
1,012,196	-				-0.3
1,012,196	-				-0.7
1,012,196	-				-0.7
1,012,240	+				+0.2
1,012,240	+				-0.6
1,012,240	+				+0.2
1,012,241	-				-0.4
1,012,241	-				+0.2
1,012,241	-				-0.5
1,012,241	-				-0.6
1,012,241	-				-0.8
1,012,241	-				-0.6
1,012,241	-				+0.2
1,012,255	+				+0.4
1,012,256	-				+0.6
1,012,256	-				-0.2
1,012,256	-				+0.5
1,012,256	-				-1.2
1,012,327	+		AO356_04470	0.15	+0.6
1,012,327	+		AO356_04470	0.15	-0.2
1,012,328	-		AO356_04470	0.15	-0.8
1,012,417	+		AO356_04470	0.25	+1.6
1,012,417	+		AO356_04470	0.25	-0.3
1,012,418	-		AO356_04470	0.25	-1.0
1,012,418	-		AO356_04470	0.25	-1.1
1,012,427	+		AO356_04470	0.26	-0.2
1,012,427	+		AO356_04470	0.26	+0.2
1,012,428	-		AO356_04470	0.26	-1.1
1,012,531	+		AO356_04470	0.36	-0.3
1,012,531	+		AO356_04470	0.36	-0.6
1,012,531	+		AO356_04470	0.36	-0.5
1,012,532	-		AO356_04470	0.36	+0.9
1,012,532	-		AO356_04470	0.36	-0.7
1,012,532	-		AO356_04470	0.36	-0.4
1,012,532	-		AO356_04470	0.36	-0.5
1,012,605	+		AO356_04470	0.44	+0.3
1,012,605	+		AO356_04470	0.44	+0.1
1,012,605	+		AO356_04470	0.44	-0.1
1,012,605	+		AO356_04470	0.44	-0.4
1,012,606	-		AO356_04470	0.44	+1.0
1,012,606	-		AO356_04470	0.44	+0.0
1,012,682	+		AO356_04470	0.52	-0.1
1,012,683	-		AO356_04470	0.52	+0.2
1,012,683	-		AO356_04470	0.52	-0.5
1,012,928	+		AO356_04470	0.77	+0.3
1,012,929	-		AO356_04470	0.77	-0.9
1,012,970	+		AO356_04470	0.82	-0.4
1,012,970	+		AO356_04470	0.82	+0.4
1,012,970	+		AO356_04470	0.82	-0.5
1,012,971	-		AO356_04470	0.82	+0.0
1,012,971	-		AO356_04470	0.82	-1.1
1,012,971	-		AO356_04470	0.82	+0.6
1,013,083	+				-0.5
1,013,083	+				-0.3
1,013,083	+				+0.6
1,013,084	-				+0.2
1,013,109	+				-0.0
1,013,166	-				+0.7
1,013,166	-				+0.5
1,013,168	-				+0.0
1,013,168	-				-1.3
1,013,168	-				-1.4
1,013,213	+				+2.5
1,013,213	+				+1.0
1,013,214	-				+0.2
1,013,214	-				+0.6
1,013,214	-				+0.2
1,013,216	+				+0.7
1,013,216	+				+0.3
1,013,217	-				-0.9
1,013,260	-				+0.2
1,013,337	-				-0.4
1,013,337	-				+0.3
1,013,337	-				-0.5
1,013,344	-				-0.3
1,013,390	-				+0.1
1,013,453	+				-0.4
1,013,454	-				-0.9
1,013,454	-				-0.9
1,013,466	-				+0.8
1,013,466	-				+0.4
1,013,561	+		AO356_04475	0.58	-1.0
1,013,561	+		AO356_04475	0.58	+0.5
1,013,561	+		AO356_04475	0.58	+0.0
1,013,561	+		AO356_04475	0.58	+0.2
1,013,561	+		AO356_04475	0.58	+0.1
1,013,562	-		AO356_04475	0.58	-0.1
1,013,562	-		AO356_04475	0.58	-0.9
1,013,562	-		AO356_04475	0.58	+0.5
1,013,562	-		AO356_04475	0.58	+0.6
1,013,562	-		AO356_04475	0.58	-0.7
1,013,562	-		AO356_04475	0.58	+0.6
1,013,663	-				+0.2
1,013,663	-				+0.1
1,013,760	+				+0.7
1,013,760	+				-0.5
1,013,805	-				+0.7
1,013,805	-				+0.6
1,013,810	-				-0.2
1,013,810	-				+0.8
1,013,810	-				-0.5
1,013,812	-				+0.7
1,013,812	-				+0.7
1,013,913	+				+0.7
1,013,913	+				-1.1
1,013,913	+				-1.3
1,013,913	+				-0.7
1,013,914	-				-0.1
1,013,914	-				+0.1
1,013,914	-				+0.2
1,013,931	+		AO356_04480	0.12	-0.3
1,013,932	-		AO356_04480	0.12	-0.2
1,013,955	+		AO356_04480	0.14	-0.2
1,013,955	+		AO356_04480	0.14	-1.3
1,013,955	+		AO356_04480	0.14	+0.9
1,013,955	+		AO356_04480	0.14	+1.0
1,013,955	+		AO356_04480	0.14	-0.3
1,013,956	-		AO356_04480	0.15	-1.0
1,013,956	-		AO356_04480	0.15	-0.0
1,013,956	-		AO356_04480	0.15	-0.3
1,013,956	-		AO356_04480	0.15	+0.4
1,013,997	+		AO356_04480	0.20	+0.2
1,013,998	-		AO356_04480	0.20	-0.7
1,014,017	+		AO356_04480	0.22	+0.9
1,014,017	+		AO356_04480	0.22	+0.0
1,014,018	-		AO356_04480	0.22	+0.4
1,014,097	-		AO356_04480	0.32	-0.2
1,014,108	+		AO356_04480	0.33	-0.4
1,014,108	+		AO356_04480	0.33	+0.6
1,014,108	+		AO356_04480	0.33	+1.1
1,014,108	+		AO356_04480	0.33	+1.0
1,014,108	+		AO356_04480	0.33	-0.3
1,014,109	-		AO356_04480	0.34	-0.8
1,014,109	-		AO356_04480	0.34	+0.6
1,014,109	-		AO356_04480	0.34	-0.4
1,014,109	-		AO356_04480	0.34	+0.2
1,014,109	-		AO356_04480	0.34	-0.4
1,014,109	-		AO356_04480	0.34	+1.3
1,014,109	-		AO356_04480	0.34	-1.4
1,014,109	-		AO356_04480	0.34	+1.1
1,014,109	-		AO356_04480	0.34	+1.3
1,014,110	+		AO356_04480	0.34	-0.5
1,014,110	+		AO356_04480	0.34	-0.2
1,014,110	+		AO356_04480	0.34	+0.5
1,014,111	-		AO356_04480	0.34	-0.9
1,014,112	+		AO356_04480	0.34	+0.0
1,014,112	+		AO356_04480	0.34	-0.5
1,014,112	+		AO356_04480	0.34	+0.2
1,014,112	+		AO356_04480	0.34	+0.8
1,014,112	+		AO356_04480	0.34	+0.7
1,014,112	+		AO356_04480	0.34	-0.1
1,014,113	-		AO356_04480	0.34	+0.2
1,014,113	-		AO356_04480	0.34	+0.4
1,014,113	-		AO356_04480	0.34	-0.7
1,014,113	-		AO356_04480	0.34	+0.2
1,014,113	-		AO356_04480	0.34	+0.8
1,014,113	-		AO356_04480	0.34	-0.2
1,014,113	-		AO356_04480	0.34	+1.2