Strain Fitness in Sinorhizobium meliloti 1021 around SMc02206

Experiment: L-Fucose (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntSMc02218 and SMc02206 are separated by 49 nucleotidesSMc02206 and SMc02219 overlap by 61 nucleotidesSMc02219 and SMc02220 are separated by 35 nucleotides SMc02218: SMc02218 - 2'-deoxycytidine 5'-triphosphate deaminase, at 580,265 to 581,362 SMc02218 SMc02206: SMc02206 - tRNA-Gly, at 581,412 to 581,486 SMc02206 SMc02219: SMc02219 - amino acid-binding periplasmic protein, at 581,426 to 582,349 SMc02219 SMc02220: SMc02220 - hypothetical protein, at 582,385 to 583,197 SMc02220 Position (kb) 581 582Strain fitness (log2 ratio) -1 0 1at 581.419 kb on + strandat 582.386 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Fucose (C)
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581,419 + -0.0
582,386 + +0.2

Or see this region's nucleotide sequence