Experiment: L-Fucose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMa0849 and SMa0850 are separated by 301 nucleotides SMa0850 and SMa0851 are separated by 133 nucleotides SMa0851 and SMa0852 are separated by 688 nucleotides SMa0852 and SMa0853 are separated by 0 nucleotides
SMa0849: SMa0849 - SyrM transcriptional regulator, at 466,418 to 467,398
SMa0849
SMa0850: SMa0850 - hypothetical protein, at 467,700 to 468,065
SMa0850
SMa0851: SMa0851 - NodH sulfotransferase, at 468,199 to 468,942
SMa0851
SMa0852: SMa0852 - acyl carrier protein, at 469,631 to 469,912
SMa0852
SMa0853: SMa0853 - 3-ketoacyl-ACP synthase, at 469,913 to 471,121
SMa0853
Position (kb)
468
469 Strain fitness (log2 ratio)
-2
-1
0
1 at 467.223 kb on + strand, within SMa0849 at 467.303 kb on + strand at 467.434 kb on + strand at 467.434 kb on + strand at 467.435 kb on - strand at 467.464 kb on - strand at 467.648 kb on - strand at 467.655 kb on + strand at 467.733 kb on - strand at 467.754 kb on - strand, within SMa0850 at 467.813 kb on + strand, within SMa0850 at 467.814 kb on - strand, within SMa0850 at 467.814 kb on - strand, within SMa0850 at 467.814 kb on - strand, within SMa0850 at 467.879 kb on + strand, within SMa0850 at 467.879 kb on + strand, within SMa0850 at 467.947 kb on + strand, within SMa0850 at 468.044 kb on + strand at 468.133 kb on + strand at 468.230 kb on + strand at 468.621 kb on + strand, within SMa0851 at 468.627 kb on + strand, within SMa0851 at 468.627 kb on + strand, within SMa0851 at 468.628 kb on - strand, within SMa0851 at 468.793 kb on - strand, within SMa0851 at 468.813 kb on - strand, within SMa0851 at 468.960 kb on + strand at 468.990 kb on - strand at 469.012 kb on - strand at 469.012 kb on - strand at 469.034 kb on + strand at 469.049 kb on + strand at 469.049 kb on + strand at 469.050 kb on - strand at 469.055 kb on + strand at 469.055 kb on + strand at 469.056 kb on - strand at 469.168 kb on - strand at 469.198 kb on - strand at 469.237 kb on + strand at 469.275 kb on + strand at 469.290 kb on + strand at 469.435 kb on + strand at 469.435 kb on + strand at 469.436 kb on - strand at 469.439 kb on + strand at 469.440 kb on - strand at 469.440 kb on - strand at 469.440 kb on - strand at 469.532 kb on + strand at 469.635 kb on + strand at 469.635 kb on + strand at 469.713 kb on + strand, within SMa0852 at 469.716 kb on + strand, within SMa0852 at 469.717 kb on - strand, within SMa0852 at 469.808 kb on + strand, within SMa0852 at 469.808 kb on + strand, within SMa0852 at 469.809 kb on - strand, within SMa0852 at 469.809 kb on - strand, within SMa0852 at 469.872 kb on + strand, within SMa0852 at 469.901 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Fucose (C) remove 467,223 + SMa0849 0.82 -1.9 467,303 + +0.2 467,434 + +1.4 467,434 + +0.2 467,435 - -1.4 467,464 - -0.7 467,648 - -0.8 467,655 + -0.1 467,733 - +0.6 467,754 - SMa0850 0.15 +0.7 467,813 + SMa0850 0.31 +0.4 467,814 - SMa0850 0.31 -0.0 467,814 - SMa0850 0.31 +0.6 467,814 - SMa0850 0.31 -0.4 467,879 + SMa0850 0.49 +0.4 467,879 + SMa0850 0.49 -0.5 467,947 + SMa0850 0.67 -1.1 468,044 + +0.0 468,133 + +0.2 468,230 + +0.6 468,621 + SMa0851 0.57 -0.9 468,627 + SMa0851 0.58 +1.1 468,627 + SMa0851 0.58 +0.4 468,628 - SMa0851 0.58 +1.3 468,793 - SMa0851 0.80 -0.0 468,813 - SMa0851 0.83 +0.1 468,960 + -0.3 468,990 - +0.3 469,012 - -0.0 469,012 - +0.1 469,034 + +0.1 469,049 + -0.8 469,049 + +0.5 469,050 - -1.1 469,055 + +0.4 469,055 + -0.9 469,056 - -0.1 469,168 - -0.6 469,198 - -0.0 469,237 + -0.1 469,275 + -0.1 469,290 + +1.0 469,435 + +1.0 469,435 + -0.1 469,436 - +0.2 469,439 + -0.3 469,440 - +0.1 469,440 - +0.1 469,440 - +0.1 469,532 + -0.7 469,635 + +0.5 469,635 + +0.5 469,713 + SMa0852 0.29 -2.1 469,716 + SMa0852 0.30 -0.5 469,717 - SMa0852 0.30 -1.0 469,808 + SMa0852 0.63 -0.1 469,808 + SMa0852 0.63 +0.3 469,809 - SMa0852 0.63 -0.1 469,809 - SMa0852 0.63 -0.2 469,872 + SMa0852 0.85 +0.0 469,901 - +0.4
Or see this region's nucleotide sequence