Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS14430

Experiment: R2A with Thallium(I) acetate 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Thallium(I) acetate 0.0001 mg/ml
3,638,048	+		CA265_RS14425	0.14	+0.2
3,638,124	+		CA265_RS14425	0.23	-0.1
3,638,146	+		CA265_RS14425	0.25	-0.1
3,638,203	-		CA265_RS14425	0.32	-0.2
3,638,203	-		CA265_RS14425	0.32	+0.1
3,638,318	-		CA265_RS14425	0.45	-1.2
3,638,391	-		CA265_RS14425	0.54	+0.8
3,638,392	-		CA265_RS14425	0.54	+0.2
3,638,439	+		CA265_RS14425	0.59	-1.0
3,638,483	-		CA265_RS14425	0.64	-0.3
3,638,487	+		CA265_RS14425	0.65	-0.8
3,638,494	-		CA265_RS14425	0.65	+0.5
3,638,526	+		CA265_RS14425	0.69	-0.3
3,638,526	+		CA265_RS14425	0.69	-1.1
3,638,530	+		CA265_RS14425	0.70	+0.9
3,638,531	-		CA265_RS14425	0.70	+0.5
3,638,534	+		CA265_RS14425	0.70	-0.1
3,638,632	+		CA265_RS14425	0.81	+0.5
3,638,632	+		CA265_RS14425	0.81	+0.1
3,638,633	-		CA265_RS14425	0.81	-2.0
3,638,633	-		CA265_RS14425	0.81	+0.8
3,638,717	-				+0.8
3,638,769	+				+0.8
3,638,793	-				+1.2
3,638,810	-				-0.2
3,638,810	-				-0.3
3,638,871	+				+1.2
3,638,871	+				+0.4
3,638,958	+				-1.2
3,638,963	+				+2.3
3,638,965	+				+0.0
3,638,969	-				+0.4
3,638,984	-				-0.3
3,638,984	-				+0.4
3,638,987	+				-0.7
3,638,991	+				+2.2
3,638,992	-				-0.8
3,639,099	+				-0.3
3,639,099	+				-0.4
3,639,099	+				+0.8
3,639,215	-		CA265_RS14430	0.13	-0.5
3,639,218	+		CA265_RS14430	0.13	-0.4
3,639,218	+		CA265_RS14430	0.13	-0.5
3,639,219	-		CA265_RS14430	0.13	-1.2
3,639,258	+		CA265_RS14430	0.16	-0.4
3,639,293	+		CA265_RS14430	0.18	-0.5
3,639,315	+		CA265_RS14430	0.20	+0.7
3,639,342	+		CA265_RS14430	0.22	+0.7
3,639,366	+		CA265_RS14430	0.23	+0.1
3,639,367	-		CA265_RS14430	0.23	-0.1
3,639,425	-		CA265_RS14430	0.27	-0.0
3,639,425	-		CA265_RS14430	0.27	+0.3
3,639,478	+		CA265_RS14430	0.31	-0.4
3,639,513	+		CA265_RS14430	0.34	-0.9
3,639,523	+		CA265_RS14430	0.34	-0.1
3,639,523	+		CA265_RS14430	0.34	+0.2
3,639,524	-		CA265_RS14430	0.34	+1.2
3,639,577	+		CA265_RS14430	0.38	-0.6
3,639,661	-		CA265_RS14430	0.44	+0.4
3,639,671	-		CA265_RS14430	0.45	-1.0
3,639,755	+		CA265_RS14430	0.51	-0.7
3,639,772	-		CA265_RS14430	0.52	+1.6
3,639,831	+		CA265_RS14430	0.56	+0.7
3,639,832	-		CA265_RS14430	0.56	-1.5
3,639,832	-		CA265_RS14430	0.56	+0.4
3,639,837	+		CA265_RS14430	0.56	+0.2
3,639,838	-		CA265_RS14430	0.57	+0.8
3,639,838	-		CA265_RS14430	0.57	-0.8
3,639,951	+		CA265_RS14430	0.65	+0.7
3,640,022	+		CA265_RS14430	0.70	-0.6
3,640,102	+		CA265_RS14430	0.75	-0.8
3,640,102	+		CA265_RS14430	0.75	+0.4
3,640,103	-		CA265_RS14430	0.75	+1.0
3,640,227	+		CA265_RS14430	0.84	-0.0
3,640,294	-		CA265_RS14430	0.89	-0.5
3,640,295	+		CA265_RS14430	0.89	+3.2
3,640,345	-				+1.4
3,640,369	-				-0.6
3,640,442	-				+0.6
3,640,462	+				+0.2
3,640,463	-				+0.0
3,640,465	+				+0.0
3,640,502	+				-0.5
3,640,529	-				+0.4
3,640,529	-				-0.7
3,640,530	+				-1.2
3,640,531	-				-0.1
3,640,609	-				-0.7
3,640,609	-				+0.8
3,640,712	+		CA265_RS14435	0.23	-0.2
3,640,712	+		CA265_RS14435	0.23	+0.6
3,640,713	-		CA265_RS14435	0.23	-0.5
3,640,713	-		CA265_RS14435	0.23	+1.1
3,640,717	-		CA265_RS14435	0.24	+0.7
3,640,745	-		CA265_RS14435	0.33	-1.5
3,640,782	-		CA265_RS14435	0.45	-0.6
3,640,928	-				-0.9
3,640,932	-				-0.8
3,640,954	-				+0.2
3,640,963	-				-0.7
3,641,031	+				-0.2
3,641,043	+				-0.7
3,641,061	+				+0.2
3,641,100	+				+0.2
3,641,122	+		CA265_RS14440	0.13	-1.2
3,641,177	-		CA265_RS14440	0.28	-2.1
3,641,230	+		CA265_RS14440	0.43	-0.2
3,641,267	-		CA265_RS14440	0.53	+1.0
3,641,268	+		CA265_RS14440	0.53	-0.7
3,641,269	-		CA265_RS14440	0.53	-0.5
3,641,333	-		CA265_RS14440	0.71	-0.1
3,641,441	-				-1.4