Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS10670

Experiment: R2A with Thallium(I) acetate 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Thallium(I) acetate 0.0001 mg/ml
2,634,812	+				+0.1
2,634,812	+				+1.6
2,634,818	+				+0.1
2,634,819	-				+0.1
2,635,008	+		CA265_RS10665	0.30	+0.4
2,635,015	-		CA265_RS10665	0.31	+1.2
2,635,015	-		CA265_RS10665	0.31	-0.6
2,635,017	+		CA265_RS10665	0.32	+0.1
2,635,017	+		CA265_RS10665	0.32	+0.6
2,635,032	-		CA265_RS10665	0.34	-0.0
2,635,101	+		CA265_RS10665	0.46	+0.7
2,635,101	+		CA265_RS10665	0.46	+0.7
2,635,102	-		CA265_RS10665	0.46	+0.6
2,635,224	+		CA265_RS10665	0.67	+0.6
2,635,225	-		CA265_RS10665	0.67	+0.7
2,635,255	-		CA265_RS10665	0.72	-1.0
2,635,323	+		CA265_RS10665	0.83	-0.3
2,635,348	-		CA265_RS10665	0.88	+0.6
2,635,415	+				+3.1
2,635,487	-				+0.3
2,635,493	-				-1.2
2,635,537	-				+0.9
2,635,557	-				+0.6
2,635,563	+				+0.2
2,635,602	+				-1.7
2,635,682	+				+1.0
2,635,746	+				+0.1
2,635,777	-				+0.7
2,635,807	+				+0.6
2,635,808	-				-0.2
2,635,834	+				+0.9
2,635,864	+				+1.1
2,635,864	+				+0.8
2,635,935	+				+0.0
2,635,935	+				-0.3
2,635,983	+				+1.4
2,635,984	-				+0.5
2,636,005	-				+0.6
2,636,008	-				-0.9
2,636,022	-				+0.7
2,636,071	+		CA265_RS10670	0.10	-0.9
2,636,096	+		CA265_RS10670	0.11	+1.3
2,636,096	+		CA265_RS10670	0.11	-1.3
2,636,142	+		CA265_RS10670	0.13	-0.7
2,636,157	-		CA265_RS10670	0.14	-0.4
2,636,174	+		CA265_RS10670	0.14	+0.6
2,636,264	+		CA265_RS10670	0.18	+1.8
2,636,264	+		CA265_RS10670	0.18	-1.1
2,636,264	+		CA265_RS10670	0.18	-2.1
2,636,272	-		CA265_RS10670	0.18	-3.1
2,636,293	-		CA265_RS10670	0.19	+1.5
2,636,457	-		CA265_RS10670	0.25	+0.0
2,636,506	+		CA265_RS10670	0.27	-0.5
2,636,507	-		CA265_RS10670	0.27	+0.2
2,636,533	-		CA265_RS10670	0.28	+0.2
2,636,577	+		CA265_RS10670	0.30	+0.1
2,636,594	-		CA265_RS10670	0.31	-0.1
2,636,646	+		CA265_RS10670	0.33	+0.2
2,636,646	+		CA265_RS10670	0.33	+0.2
2,636,651	+		CA265_RS10670	0.33	+0.8
2,636,651	+		CA265_RS10670	0.33	-0.5
2,636,669	+		CA265_RS10670	0.33	+3.4
2,636,679	+		CA265_RS10670	0.34	+1.2
2,636,680	-		CA265_RS10670	0.34	-1.2
2,636,688	-		CA265_RS10670	0.34	-0.1
2,636,690	+		CA265_RS10670	0.34	+0.1
2,636,727	+		CA265_RS10670	0.36	+0.1
2,636,730	+		CA265_RS10670	0.36	+0.2
2,636,797	+		CA265_RS10670	0.38	+0.5
2,636,797	+				+1.1
2,636,798	-		CA265_RS10670	0.38	-1.9
2,636,798	-		CA265_RS10670	0.38	+0.7
2,636,798	-		CA265_RS10670	0.38	+0.6
2,636,803	+		CA265_RS10670	0.39	-0.3
2,636,851	-		CA265_RS10670	0.41	-0.4
2,637,019	-		CA265_RS10670	0.47	-1.2
2,637,058	-		CA265_RS10670	0.49	-0.1
2,637,136	-		CA265_RS10670	0.52	-0.0
2,637,249	+		CA265_RS10670	0.56	+1.4
2,637,285	-		CA265_RS10670	0.57	-0.0
2,637,320	+		CA265_RS10670	0.59	+0.7
2,637,358	+		CA265_RS10670	0.60	+0.3
2,637,476	+		CA265_RS10670	0.65	+0.6
2,637,520	+		CA265_RS10670	0.66	-0.3
2,637,635	+		CA265_RS10670	0.71	+0.5
2,637,701	+		CA265_RS10670	0.73	+0.6
2,637,702	-		CA265_RS10670	0.73	-0.4
2,637,831	+		CA265_RS10670	0.78	+0.2
2,637,836	-		CA265_RS10670	0.79	+1.7
2,637,857	+		CA265_RS10670	0.79	-0.5
2,637,903	+		CA265_RS10670	0.81	+0.6
2,637,932	-		CA265_RS10670	0.82	-0.2
2,638,017	-		CA265_RS10670	0.86	-1.4
2,638,065	+		CA265_RS10670	0.88	+0.3
2,638,132	-				-0.8
2,638,177	-				-0.3
2,638,206	+				-0.1
2,638,207	-				+0.4
2,638,207	-				-0.2
2,638,263	+				+0.0
2,638,354	-				-0.4
2,638,367	+				+0.1
2,638,371	+				-0.7
2,638,394	-				-0.6
2,638,609	+				+0.9
2,638,676	-				+1.6
2,638,707	-				+1.0
2,638,707	-				-0.7
2,638,711	-				+1.2
2,638,713	-				+0.3
2,638,713	-				+0.3
2,638,714	+				+0.1
2,638,714	+				-0.9
2,638,715	-				+0.4
2,638,763	+				-0.6
2,638,763	+				-1.9
2,638,781	+				+0.3
2,638,798	-				+0.7
2,638,808	+				+0.9
2,638,809	-				+0.1
2,638,843	-				+0.7