Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS04340

Experiment: R2A with Thallium(I) acetate 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Thallium(I) acetate 0.0001 mg/ml
1,043,891	+		CA265_RS04330	0.34	-0.1
1,043,904	+		CA265_RS04330	0.38	+0.4
1,043,913	-		CA265_RS04330	0.41	-1.8
1,043,913	-		CA265_RS04330	0.41	-1.1
1,043,929	-		CA265_RS04330	0.47	+0.6
1,043,933	+		CA265_RS04330	0.48	-1.1
1,043,937	+		CA265_RS04330	0.49	+0.7
1,043,964	+		CA265_RS04330	0.59	+0.1
1,044,027	+		CA265_RS04330	0.80	-0.7
1,044,034	-		CA265_RS04330	0.82	+0.5
1,044,034	-		CA265_RS04330	0.82	+0.2
1,044,144	-				-0.7
1,044,145	+				-0.4
1,044,145	+				+2.6
1,044,146	-				+0.1
1,044,168	-		CA265_RS04335	0.12	+1.1
1,044,209	+		CA265_RS04335	0.19	+0.7
1,044,209	+		CA265_RS04335	0.19	+0.1
1,044,209	+		CA265_RS04335	0.19	-0.5
1,044,209	+		CA265_RS04335	0.19	+0.7
1,044,210	-		CA265_RS04335	0.19	-0.1
1,044,210	-		CA265_RS04335	0.19	+0.2
1,044,212	+		CA265_RS04335	0.19	+1.2
1,044,213	-		CA265_RS04335	0.19	-0.4
1,044,247	-		CA265_RS04335	0.25	-1.2
1,044,266	-		CA265_RS04335	0.28	-0.5
1,044,266	-		CA265_RS04335	0.28	-0.2
1,044,290	+		CA265_RS04335	0.32	-0.3
1,044,310	+		CA265_RS04335	0.35	-0.9
1,044,311	-		CA265_RS04335	0.35	+0.1
1,044,315	+		CA265_RS04335	0.36	-1.0
1,044,316	-		CA265_RS04335	0.36	+0.1
1,044,316	-		CA265_RS04335	0.36	+1.7
1,044,349	+		CA265_RS04335	0.41	-1.3
1,044,353	+		CA265_RS04335	0.42	-0.9
1,044,380	+		CA265_RS04335	0.46	-0.1
1,044,380	+		CA265_RS04335	0.46	+0.2
1,044,385	+		CA265_RS04335	0.47	+0.1
1,044,452	-		CA265_RS04335	0.57	-0.1
1,044,493	+		CA265_RS04335	0.64	+0.5
1,044,613	+		CA265_RS04335	0.82	+0.2
1,044,613	+		CA265_RS04335	0.82	+0.0
1,044,613	+		CA265_RS04335	0.82	-0.0
1,044,614	-		CA265_RS04335	0.83	+0.3
1,044,636	-		CA265_RS04335	0.86	+1.4
1,044,636	-				+3.1
1,044,636	-		CA265_RS04335	0.86	-0.1
1,044,766	+		CA265_RS04340	0.26	+0.8
1,044,856	+		CA265_RS04340	0.72	+0.6
1,044,858	+		CA265_RS04340	0.73	+0.5
1,044,858	+		CA265_RS04340	0.73	-0.2
1,044,858	+		CA265_RS04340	0.73	+2.3
1,044,859	-		CA265_RS04340	0.74	-0.7
1,044,860	+		CA265_RS04340	0.74	-0.1
1,044,888	+		CA265_RS04340	0.89	+1.5
1,044,900	+				+1.8
1,044,911	-				-1.2
1,045,593	-				+0.9
1,045,601	-				-0.7
1,045,640	-				+1.1
1,045,662	+				-0.4
1,045,663	-				+3.1
1,045,663	-				-0.1
1,045,664	+				+0.3
1,045,715	-				+0.7
1,045,715	-				+0.3
1,045,777	+		CA265_RS04350	0.23	+0.5
1,045,805	-		CA265_RS04350	0.29	+0.6
1,045,805	-		CA265_RS04350	0.29	-0.1
1,045,818	-		CA265_RS04350	0.31	-0.2
1,045,827	-		CA265_RS04350	0.33	+1.5
1,045,836	-		CA265_RS04350	0.35	+1.7
1,045,867	+		CA265_RS04350	0.41	-0.3
1,045,875	-		CA265_RS04350	0.43	-0.3
1,045,894	-		CA265_RS04350	0.47	-0.1