Experiment: R2A with Thallium(I) acetate 0.0001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA265_RS03150 and CA265_RS03155 are separated by 25 nucleotides CA265_RS03155 and CA265_RS03160 are separated by 1 nucleotides CA265_RS03160 and CA265_RS03165 are separated by 115 nucleotides
CA265_RS03150: CA265_RS03150 - flavin reductase, at 779,269 to 780,156
_RS03150
CA265_RS03155: CA265_RS03155 - hypothetical protein, at 780,182 to 780,787
_RS03155
CA265_RS03160: CA265_RS03160 - hydrolase, at 780,789 to 781,433
_RS03160
CA265_RS03165: CA265_RS03165 - hypothetical protein, at 781,549 to 781,923
_RS03165
Position (kb) 780
781 Strain fitness (log2 ratio) -2
-1
0
1
2 at 779.187 kb on - strand at 779.238 kb on + strand at 779.239 kb on - strand at 779.261 kb on - strand at 779.326 kb on + strand at 779.390 kb on + strand, within CA265_RS03150 at 779.391 kb on - strand, within CA265_RS03150 at 779.418 kb on + strand, within CA265_RS03150 at 779.419 kb on - strand, within CA265_RS03150 at 779.472 kb on + strand, within CA265_RS03150 at 779.613 kb on + strand, within CA265_RS03150 at 779.680 kb on - strand, within CA265_RS03150 at 779.680 kb on - strand, within CA265_RS03150 at 779.685 kb on - strand, within CA265_RS03150 at 779.769 kb on + strand, within CA265_RS03150 at 779.839 kb on + strand, within CA265_RS03150 at 779.844 kb on + strand, within CA265_RS03150 at 779.845 kb on - strand, within CA265_RS03150 at 779.877 kb on + strand, within CA265_RS03150 at 779.890 kb on - strand, within CA265_RS03150 at 779.894 kb on + strand, within CA265_RS03150 at 779.894 kb on + strand, within CA265_RS03150 at 779.900 kb on + strand, within CA265_RS03150 at 779.900 kb on + strand, within CA265_RS03150 at 779.901 kb on - strand, within CA265_RS03150 at 779.901 kb on - strand, within CA265_RS03150 at 779.901 kb on - strand, within CA265_RS03150 at 779.943 kb on - strand, within CA265_RS03150 at 780.170 kb on - strand at 780.170 kb on - strand at 780.181 kb on + strand at 780.188 kb on - strand at 780.209 kb on + strand at 780.210 kb on - strand at 780.271 kb on + strand, within CA265_RS03155 at 780.272 kb on - strand, within CA265_RS03155 at 780.272 kb on - strand, within CA265_RS03155 at 780.410 kb on + strand, within CA265_RS03155 at 780.459 kb on + strand, within CA265_RS03155 at 780.504 kb on - strand, within CA265_RS03155 at 780.504 kb on - strand, within CA265_RS03155 at 780.507 kb on + strand, within CA265_RS03155 at 780.508 kb on - strand, within CA265_RS03155 at 780.508 kb on - strand, within CA265_RS03155 at 780.525 kb on + strand, within CA265_RS03155 at 780.541 kb on - strand, within CA265_RS03155 at 780.678 kb on + strand, within CA265_RS03155 at 780.678 kb on + strand, within CA265_RS03155 at 780.679 kb on - strand, within CA265_RS03155 at 780.710 kb on - strand, within CA265_RS03155 at 780.792 kb on + strand at 780.793 kb on - strand at 780.794 kb on + strand at 780.794 kb on + strand at 780.797 kb on + strand at 780.797 kb on + strand at 780.826 kb on + strand at 780.826 kb on + strand at 780.827 kb on - strand at 780.909 kb on - strand, within CA265_RS03160 at 780.933 kb on + strand, within CA265_RS03160 at 780.933 kb on + strand, within CA265_RS03160 at 781.018 kb on + strand, within CA265_RS03160 at 781.072 kb on + strand, within CA265_RS03160 at 781.072 kb on + strand, within CA265_RS03160 at 781.140 kb on + strand, within CA265_RS03160 at 781.141 kb on - strand, within CA265_RS03160 at 781.145 kb on + strand, within CA265_RS03160 at 781.215 kb on - strand, within CA265_RS03160 at 781.417 kb on - strand at 781.526 kb on - strand at 781.646 kb on - strand, within CA265_RS03165 at 781.677 kb on + strand, within CA265_RS03165 at 781.678 kb on - strand, within CA265_RS03165 at 781.679 kb on + strand, within CA265_RS03165 at 781.680 kb on - strand, within CA265_RS03165 at 781.680 kb on - strand, within CA265_RS03165 at 781.691 kb on - strand, within CA265_RS03165 at 781.693 kb on - strand, within CA265_RS03165
Per-strain Table
Position Strand Gene LocusTag Fraction R2A with Thallium(I) acetate 0.0001 mg/ml remove 779,187 - -1.8 779,238 + +0.6 779,239 - -1.4 779,261 - -0.4 779,326 + +0.2 779,390 + CA265_RS03150 0.14 +0.6 779,391 - CA265_RS03150 0.14 -1.2 779,418 + CA265_RS03150 0.17 -1.0 779,419 - CA265_RS03150 0.17 +0.1 779,472 + CA265_RS03150 0.23 +0.2 779,613 + CA265_RS03150 0.39 -0.4 779,680 - CA265_RS03150 0.46 +0.5 779,680 - CA265_RS03150 0.46 -1.0 779,685 - CA265_RS03150 0.47 +0.2 779,769 + CA265_RS03150 0.56 +0.1 779,839 + CA265_RS03150 0.64 -0.3 779,844 + CA265_RS03150 0.65 +1.9 779,845 - CA265_RS03150 0.65 +0.4 779,877 + CA265_RS03150 0.68 -0.3 779,890 - CA265_RS03150 0.70 +1.6 779,894 + CA265_RS03150 0.70 +0.7 779,894 + CA265_RS03150 0.70 +0.3 779,900 + CA265_RS03150 0.71 +0.6 779,900 + CA265_RS03150 0.71 +1.1 779,901 - CA265_RS03150 0.71 +0.3 779,901 - CA265_RS03150 0.71 +0.4 779,901 - CA265_RS03150 0.71 +0.6 779,943 - CA265_RS03150 0.76 -0.0 780,170 - +0.3 780,170 - +0.5 780,181 + +1.3 780,188 - +1.1 780,209 + -0.8 780,210 - +1.3 780,271 + CA265_RS03155 0.15 +1.6 780,272 - CA265_RS03155 0.15 +0.6 780,272 - CA265_RS03155 0.15 +0.7 780,410 + CA265_RS03155 0.38 +1.6 780,459 + CA265_RS03155 0.46 +1.4 780,504 - CA265_RS03155 0.53 +1.6 780,504 - CA265_RS03155 0.53 +0.5 780,507 + CA265_RS03155 0.54 -0.4 780,508 - CA265_RS03155 0.54 +2.7 780,508 - CA265_RS03155 0.54 -0.4 780,525 + CA265_RS03155 0.57 -0.0 780,541 - CA265_RS03155 0.59 -0.0 780,678 + CA265_RS03155 0.82 +0.7 780,678 + CA265_RS03155 0.82 +2.1 780,679 - CA265_RS03155 0.82 -0.1 780,710 - CA265_RS03155 0.87 -0.5 780,792 + +1.0 780,793 - -0.6 780,794 + +0.3 780,794 + -1.6 780,797 + +0.4 780,797 + -0.0 780,826 + +0.3 780,826 + +0.4 780,827 - -0.5 780,909 - CA265_RS03160 0.19 +0.6 780,933 + CA265_RS03160 0.22 +0.4 780,933 + CA265_RS03160 0.22 -0.8 781,018 + CA265_RS03160 0.36 -1.8 781,072 + CA265_RS03160 0.44 -0.8 781,072 + CA265_RS03160 0.44 +1.6 781,140 + CA265_RS03160 0.54 +1.7 781,141 - CA265_RS03160 0.55 -0.2 781,145 + CA265_RS03160 0.55 +0.9 781,215 - CA265_RS03160 0.66 +0.1 781,417 - -1.4 781,526 - +0.1 781,646 - CA265_RS03165 0.26 +0.2 781,677 + CA265_RS03165 0.34 -0.3 781,678 - CA265_RS03165 0.34 -2.0 781,679 + CA265_RS03165 0.35 -1.1 781,680 - CA265_RS03165 0.35 -0.8 781,680 - CA265_RS03165 0.35 -0.1 781,691 - CA265_RS03165 0.38 +0.0 781,693 - CA265_RS03165 0.38 +0.2
Or see this region's nucleotide sequence