Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_3644
Experiment: KB with Acriflavine 7.75 ug/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | KB with Acriflavine 7.75 ug/ml |
---|---|---|---|---|---|
remove | |||||
4,326,587 | - | -0.8 | |||
4,326,809 | - | Psyr_3644 | 0.20 | +1.0 | |
4,327,177 | + | Psyr_3644 | 0.43 | -0.3 | |
4,327,244 | + | Psyr_3644 | 0.47 | +4.1 | |
4,327,244 | + | Psyr_3644 | 0.47 | -1.4 | |
4,327,245 | - | Psyr_3644 | 0.47 | -0.6 | |
4,327,430 | + | Psyr_3644 | 0.59 | -1.4 | |
4,327,431 | - | Psyr_3644 | 0.59 | -1.1 | |
4,327,431 | - | Psyr_3644 | 0.59 | -0.1 | |
4,327,633 | + | Psyr_3644 | 0.71 | -2.4 | |
4,328,103 | + | -0.4 | |||
4,328,104 | - | +0.4 | |||
4,328,124 | - | -1.2 | |||
4,328,124 | - | +0.9 | |||
4,328,133 | - | +1.2 | |||
4,328,133 | - | +0.3 |
Or see this region's nucleotide sequence