Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_2754

Experiment: KB with Acriflavine 7.75 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Acriflavine 7.75 ug/ml
3,341,475	+		Psyr_2753	0.32	+1.2
3,341,475	+		Psyr_2753	0.32	-0.2
3,341,475	+		Psyr_2753	0.32	-0.8
3,341,475	+		Psyr_2753	0.32	+0.3
3,341,475	+		Psyr_2753	0.32	-0.0
3,341,475	+		Psyr_2753	0.32	+0.4
3,341,475	+		Psyr_2753	0.32	-1.9
3,341,476	-		Psyr_2753	0.32	-0.2
3,341,476	-		Psyr_2753	0.32	-1.0
3,341,476	-		Psyr_2753	0.32	+2.1
3,341,476	-		Psyr_2753	0.32	+0.9
3,341,476	-		Psyr_2753	0.32	+0.5
3,342,023	+		Psyr_2753	0.87	-1.1
3,342,023	+		Psyr_2753	0.87	-0.0
3,342,023	+		Psyr_2753	0.87	-1.3
3,342,023	+		Psyr_2753	0.87	+0.0
3,342,023	+		Psyr_2753	0.87	-0.2
3,342,023	+		Psyr_2753	0.87	-0.3
3,342,024	-		Psyr_2753	0.87	+0.3
3,342,024	-		Psyr_2753	0.87	-1.3
3,342,024	-		Psyr_2753	0.87	-0.1
3,342,024	-		Psyr_2753	0.87	-0.9
3,342,024	-		Psyr_2753	0.87	-1.9
3,342,024	-		Psyr_2753	0.87	+0.5
3,342,147	+				+0.5
3,342,147	+				+0.3
3,342,148	-				+0.7
3,342,148	-				-2.1
3,342,148	-				-0.6
3,342,148	-				-0.2
3,342,148	-				-1.5
3,342,247	+				+0.7
3,342,248	-				-1.7
3,342,601	-		Psyr_2754	0.61	-1.5
3,342,601	-		Psyr_2754	0.61	-0.5
3,342,645	+		Psyr_2754	0.68	-0.9
3,342,645	+		Psyr_2754	0.68	-1.3
3,342,645	+		Psyr_2754	0.68	-0.7
3,342,645	+		Psyr_2754	0.68	-0.9
3,342,645	+		Psyr_2754	0.68	+0.5
3,342,645	+		Psyr_2754	0.68	+0.7
3,342,651	+		Psyr_2754	0.69	+0.5
3,342,652	-		Psyr_2754	0.69	+0.6
3,342,652	-		Psyr_2754	0.69	-0.8
3,342,652	-		Psyr_2754	0.69	-0.6
3,342,652	-		Psyr_2754	0.69	-1.0
3,342,690	+		Psyr_2754	0.75	+1.7
3,342,690	+		Psyr_2754	0.75	-1.1
3,342,690	+		Psyr_2754	0.75	-1.6
3,342,690	+		Psyr_2754	0.75	-0.4
3,342,690	+				-0.6
3,342,690	+		Psyr_2754	0.75	-0.1
3,342,691	-		Psyr_2754	0.75	-2.3
3,342,691	-		Psyr_2754	0.75	-0.5
3,342,691	-		Psyr_2754	0.75	-0.9
3,342,691	-		Psyr_2754	0.75	-1.2
3,342,691	-		Psyr_2754	0.75	-0.7
3,342,691	-		Psyr_2754	0.75	-1.3
3,342,691	-		Psyr_2754	0.75	+2.1
3,342,691	-		Psyr_2754	0.75	+1.5
3,342,691	-		Psyr_2754	0.75	+0.2
3,342,856	+				-0.1
3,342,868	-				+0.7
3,343,283	+		Psyr_2755	0.27	-0.1
3,343,286	+		Psyr_2755	0.27	-2.2
3,343,286	+		Psyr_2755	0.27	-1.6
3,343,287	-		Psyr_2755	0.27	+0.1
3,343,678	-		Psyr_2755	0.64	+1.0
3,343,691	-		Psyr_2755	0.65	+0.5
3,343,727	+		Psyr_2755	0.68	+0.9
3,343,728	-		Psyr_2755	0.68	-0.1
3,343,728	-		Psyr_2755	0.68	-0.8
3,343,728	-		Psyr_2755	0.68	-1.9