Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_2448

Experiment: KB with Acriflavine 7.75 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Acriflavine 7.75 ug/ml
2,834,425	-		Psyr_2446	0.65	-1.1
2,834,427	+		Psyr_2446	0.65	-1.3
2,834,428	-		Psyr_2446	0.65	-0.4
2,834,440	-		Psyr_2446	0.66	-0.3
2,834,446	-		Psyr_2446	0.67	-0.4
2,834,511	-		Psyr_2446	0.75	+1.2
2,834,516	-		Psyr_2446	0.75	+1.1
2,834,668	-				+0.3
2,834,823	+		Psyr_2447	0.17	+1.0
2,834,848	+		Psyr_2447	0.21	-1.0
2,834,848	+		Psyr_2447	0.21	+1.2
2,834,849	-		Psyr_2447	0.21	+1.1
2,834,849	-		Psyr_2447	0.21	+1.1
2,834,849	-		Psyr_2447	0.21	-2.0
2,834,981	+		Psyr_2447	0.42	+0.0
2,834,981	+		Psyr_2447	0.42	+0.2
2,834,981	+		Psyr_2447	0.42	+0.7
2,834,981	+		Psyr_2447	0.42	-0.4
2,834,982	-		Psyr_2447	0.43	+0.3
2,835,059	+		Psyr_2447	0.55	-1.1
2,835,185	+		Psyr_2447	0.76	-1.7
2,835,185	+		Psyr_2447	0.76	+0.6
2,835,185	+		Psyr_2447	0.76	-1.1
2,835,185	+		Psyr_2447	0.76	+1.6
2,835,185	+		Psyr_2447	0.76	-1.0
2,835,185	+		Psyr_2447	0.76	+1.7
2,835,186	-		Psyr_2447	0.76	+0.5
2,835,186	-		Psyr_2447	0.76	-1.6
2,835,232	+		Psyr_2447	0.83	+0.3
2,835,232	+		Psyr_2447	0.83	-0.4
2,835,232	+		Psyr_2447	0.83	-0.8
2,835,232	+		Psyr_2447	0.83	-0.8
2,835,232	+		Psyr_2447	0.83	-1.3
2,835,232	+		Psyr_2447	0.83	-0.3
2,835,232	+		Psyr_2447	0.83	+0.0
2,835,232	+		Psyr_2447	0.83	-0.5
2,835,233	-		Psyr_2447	0.83	+0.6
2,835,233	-		Psyr_2447	0.83	+1.1
2,835,233	-		Psyr_2447	0.83	-0.3
2,835,272	+		Psyr_2447	0.90	-0.3
2,835,291	-				-0.8
2,835,332	+				-1.0
2,835,332	+				-0.4
2,835,333	-				-0.3
2,835,333	-				-1.0
2,835,333	-				+0.0
2,835,427	+				-0.5
2,835,428	-				-1.3
2,835,611	-		Psyr_2448	0.24	-1.6
2,835,625	+		Psyr_2448	0.25	-0.7
2,835,626	-		Psyr_2448	0.25	-0.6
2,835,735	-		Psyr_2448	0.34	-0.8
2,835,946	-		Psyr_2448	0.52	-0.3
2,836,031	+		Psyr_2448	0.59	-0.5
2,836,031	+		Psyr_2448	0.59	-0.6
2,836,031	+		Psyr_2448	0.59	-0.1
2,836,032	-		Psyr_2448	0.60	-0.3
2,836,032	-		Psyr_2448	0.60	-1.3
2,836,273	+		Psyr_2448	0.80	+0.0
2,836,273	+		Psyr_2448	0.80	-0.8
2,836,273	+		Psyr_2448	0.80	-2.2
2,836,274	-		Psyr_2448	0.80	-0.4
2,836,274	-		Psyr_2448	0.80	-0.7
2,836,317	+		Psyr_2448	0.84	-0.9
2,836,492	-				+0.2
2,836,492	-				+0.1
2,836,536	-				-0.3
2,836,586	+				+0.7
2,836,586	+				-1.3
2,836,587	-				+1.1
2,836,587	-				-0.3
2,836,587	-				-1.8
2,836,587	-				-2.1
2,836,587	-				-2.5
2,836,587	-				-1.8
2,836,590	+				-0.0
2,836,591	-				+0.1
2,836,591	-				-1.7
2,836,592	+				-1.6
2,836,640	-		Psyr_2449	0.19	+0.6
2,836,683	+		Psyr_2449	0.29	+0.5
2,836,683	+		Psyr_2449	0.29	-0.8
2,836,683	+		Psyr_2449	0.29	-1.2
2,836,684	-		Psyr_2449	0.29	-2.9
2,836,684	-		Psyr_2449	0.29	-0.4
2,836,992	+				-1.5
2,836,993	-				-1.8
2,836,993	-				-0.6
2,837,245	+				-1.3
2,837,245	+				-1.3
2,837,245	+				-1.1
2,837,246	-				+1.4
2,837,260	+		Psyr_2450	0.11	-0.1
2,837,260	+		Psyr_2450	0.11	+0.1
2,837,261	-		Psyr_2450	0.11	+0.4
2,837,261	-		Psyr_2450	0.11	-1.0
2,837,489	-		Psyr_2450	0.22	+0.3