Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_2306

Experiment: KB with Acriflavine 7.75 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Acriflavine 7.75 ug/ml
2,680,822	+		Psyr_2305	0.39	-2.4
2,680,823	-		Psyr_2305	0.39	-0.2
2,680,823	-		Psyr_2305	0.39	+1.2
2,680,950	+		Psyr_2305	0.49	+0.3
2,680,950	+		Psyr_2305	0.49	+0.3
2,680,950	+		Psyr_2305	0.49	-0.2
2,680,950	+		Psyr_2305	0.49	-0.9
2,680,951	-		Psyr_2305	0.49	+0.5
2,680,992	-		Psyr_2305	0.52	+0.2
2,680,998	+		Psyr_2305	0.53	-0.2
2,680,998	+		Psyr_2305	0.53	-0.2
2,681,603	-				-1.8
2,681,603	-				-0.8
2,681,603	-				+0.4
2,681,911	+		Psyr_2306	0.15	+0.8
2,681,912	-		Psyr_2306	0.16	+0.5
2,681,912	-		Psyr_2306	0.16	+3.2
2,681,912	-		Psyr_2306	0.16	-0.2
2,681,912	-		Psyr_2306	0.16	+0.5
2,681,912	-		Psyr_2306	0.16	-0.8
2,681,913	+		Psyr_2306	0.16	+0.6
2,682,004	+		Psyr_2306	0.22	+1.3
2,682,004	+		Psyr_2306	0.22	+0.1
2,682,004	+		Psyr_2306	0.22	-0.4
2,682,004	+		Psyr_2306	0.22	-0.1
2,682,004	+		Psyr_2306	0.22	+1.3
2,682,005	-		Psyr_2306	0.22	-1.7
2,682,005	-		Psyr_2306	0.22	-0.4
2,682,005	-		Psyr_2306	0.22	+0.3
2,682,005	-		Psyr_2306	0.22	-0.1
2,682,042	+		Psyr_2306	0.25	-0.8
2,682,042	+		Psyr_2306	0.25	-0.1
2,682,043	-		Psyr_2306	0.25	-1.1
2,682,043	-		Psyr_2306	0.25	+0.3
2,682,043	-		Psyr_2306	0.25	+1.2
2,682,043	-		Psyr_2306	0.25	-0.2
2,682,097	+		Psyr_2306	0.28	-0.2
2,682,165	+		Psyr_2306	0.33	+1.8
2,682,166	-		Psyr_2306	0.33	+0.4
2,682,348	-		Psyr_2306	0.46	+0.8
2,682,389	+		Psyr_2306	0.48	+0.5
2,682,389	+		Psyr_2306	0.48	+0.3
2,682,419	+		Psyr_2306	0.50	+0.8
2,682,420	-		Psyr_2306	0.51	-0.6
2,682,420	-		Psyr_2306	0.51	+1.1
2,682,563	-		Psyr_2306	0.60	+0.9
2,682,584	-		Psyr_2306	0.62	+0.4
2,682,584	-		Psyr_2306	0.62	-0.2
2,682,584	-		Psyr_2306	0.62	-0.2
2,682,607	+		Psyr_2306	0.63	-0.7
2,682,607	+		Psyr_2306	0.63	+0.8
2,682,607	+		Psyr_2306	0.63	+0.1
2,682,607	+		Psyr_2306	0.63	+1.8
2,682,607	+		Psyr_2306	0.63	+0.4
2,682,607	+		Psyr_2306	0.63	+0.0
2,682,607	+		Psyr_2306	0.63	-0.8
2,682,607	+		Psyr_2306	0.63	-0.2
2,682,607	+		Psyr_2306	0.63	+0.3
2,682,607	+		Psyr_2306	0.63	+0.2
2,682,608	-		Psyr_2306	0.63	+0.3
2,682,608	-		Psyr_2306	0.63	+1.1
2,682,608	-		Psyr_2306	0.63	-0.5
2,682,608	-		Psyr_2306	0.63	+2.8
2,682,608	-		Psyr_2306	0.63	+1.1
2,682,608	-		Psyr_2306	0.63	-1.2
2,682,608	-		Psyr_2306	0.63	+1.3
2,682,638	-		Psyr_2306	0.66	+1.8
2,682,733	+		Psyr_2306	0.72	-0.8
2,682,734	-		Psyr_2306	0.72	+1.0
2,682,734	-		Psyr_2306	0.72	-2.7
2,682,734	-		Psyr_2306	0.72	+1.5
2,682,734	-		Psyr_2306	0.72	-0.8
2,682,862	+		Psyr_2306	0.81	+1.2
2,682,863	-		Psyr_2306	0.81	-0.6
2,682,923	-		Psyr_2306	0.85	+0.5
2,683,244	+		Psyr_2307	0.45	+0.3
2,683,307	+		Psyr_2307	0.73	+0.6
2,683,307	+		Psyr_2307	0.73	+1.2
2,683,307	+		Psyr_2307	0.73	-0.2
2,683,307	+		Psyr_2307	0.73	+0.2
2,683,307	+		Psyr_2307	0.73	+0.6
2,683,307	+		Psyr_2307	0.73	-0.2
2,683,307	+		Psyr_2307	0.73	+0.4
2,683,307	+		Psyr_2307	0.73	+1.6
2,683,307	+		Psyr_2307	0.73	+0.3
2,683,308	-		Psyr_2307	0.74	+0.8
2,683,308	-		Psyr_2307	0.74	+0.3
2,683,308	-		Psyr_2307	0.74	+0.0
2,683,308	-		Psyr_2307	0.74	+0.1
2,683,308	-		Psyr_2307	0.74	+0.1
2,683,308	-		Psyr_2307	0.74	+1.3
2,683,356	+				+0.0
2,683,356	+				+0.8
2,683,356	+				-0.1
2,683,356	+				+0.6
2,683,356	+				-0.2
2,683,356	+				+0.2
2,683,356	+				+1.8
2,683,357	-				-2.2
2,683,357	-				-1.3
2,683,357	-				-0.8
2,683,357	-				+0.1
2,683,357	-				+0.2
2,683,357	-				-0.7
2,683,376	+				+0.6
2,683,377	-				-1.7
2,683,392	+				+1.8
2,683,392	+				+0.0
2,683,392	+				+0.4
2,683,393	-				+0.8
2,683,395	+				+0.5
2,683,453	+				+0.2
2,683,457	+				+0.9
2,683,457	+				+3.3
2,683,458	-				-0.1
2,683,458	-				-0.5
2,683,497	-				+0.0
2,683,675	-		Psyr_2308	0.88	-0.2
2,683,692	+				+0.8
2,683,692	+				+0.3
2,683,692	+				+0.8
2,683,692	+				+0.5
2,683,693	-				+0.4
2,683,928	+		Psyr_2309	0.31	-0.0
2,683,928	+		Psyr_2309	0.31	-1.3
2,683,928	+		Psyr_2309	0.31	+0.8
2,683,929	-		Psyr_2309	0.31	+0.1
2,683,929	-		Psyr_2309	0.31	+1.0
2,683,929	-		Psyr_2309	0.31	-0.2
2,683,929	-		Psyr_2309	0.31	-0.5
2,683,929	-		Psyr_2309	0.31	-1.2
2,684,102	+		Psyr_2309	0.63	+0.4
2,684,112	+		Psyr_2309	0.64	+0.2
2,684,129	+		Psyr_2309	0.68	-1.8