Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_2282

Experiment: KB with Acriflavine 7.75 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Acriflavine 7.75 ug/ml
2,649,794	-		Psyr_2281	0.60	-1.4
2,650,001	+		Psyr_2281	0.72	-0.2
2,650,321	-				+1.1
2,650,321	-				+0.5
2,650,321	-				-1.2
2,650,379	+				+0.4
2,650,379	+				+0.6
2,650,380	-				+0.0
2,650,380	-				-1.4
2,650,380	-				+0.5
2,650,861	+		Psyr_2282	0.12	-0.8
2,650,862	-		Psyr_2282	0.12	-0.8
2,650,963	+				+0.3
2,650,963	+		Psyr_2282	0.15	-3.3
2,650,963	+		Psyr_2282	0.15	-1.2
2,650,963	+		Psyr_2282	0.15	-2.7
2,650,963	+		Psyr_2282	0.15	-1.2
2,651,047	+		Psyr_2282	0.18	-4.1
2,651,047	+		Psyr_2282	0.18	-2.2
2,651,048	-		Psyr_2282	0.18	-4.0
2,651,048	-		Psyr_2282	0.18	-3.0
2,651,129	+		Psyr_2282	0.21	-2.7
2,651,269	+		Psyr_2282	0.25	-2.4
2,651,270	-		Psyr_2282	0.25	-2.0
2,651,836	+				-0.2
2,651,836	+		Psyr_2282	0.43	-1.8
2,651,836	+		Psyr_2282	0.43	-1.8
2,651,836	+		Psyr_2282	0.43	-2.4
2,651,837	-		Psyr_2282	0.43	-2.9
2,651,837	-		Psyr_2282	0.43	-1.8
2,651,837	-		Psyr_2282	0.43	-1.6
2,651,837	-		Psyr_2282	0.43	-0.8
2,651,837	-		Psyr_2282	0.43	-2.0
2,651,992	+		Psyr_2282	0.48	-1.8
2,651,992	+		Psyr_2282	0.48	-4.1
2,652,005	-		Psyr_2282	0.48	-1.6
2,652,005	-		Psyr_2282	0.48	-3.3
2,652,220	+		Psyr_2282	0.55	-1.1
2,652,220	+		Psyr_2282	0.55	-1.6
2,652,221	-		Psyr_2282	0.55	-2.9
2,652,221	-		Psyr_2282	0.55	-2.7
2,652,221	-		Psyr_2282	0.55	-2.9
2,652,410	+		Psyr_2282	0.61	-2.8
2,652,469	+		Psyr_2282	0.63	-2.6
2,652,469	+		Psyr_2282	0.63	-2.3
2,652,469	+		Psyr_2282	0.63	-0.8
2,652,469	+		Psyr_2282	0.63	-2.2
2,652,470	-		Psyr_2282	0.63	-2.4
2,652,470	-		Psyr_2282	0.63	-3.6
2,652,595	+		Psyr_2282	0.67	-4.3
2,652,595	+		Psyr_2282	0.67	-2.0
2,652,595	+		Psyr_2282	0.67	-1.5
2,652,595	+		Psyr_2282	0.67	-2.0
2,652,595	+		Psyr_2282	0.67	-2.7
2,652,595	+		Psyr_2282	0.67	-0.8
2,652,596	-		Psyr_2282	0.67	-4.3
2,652,596	-		Psyr_2282	0.67	-3.2
2,652,596	-		Psyr_2282	0.67	-3.5
2,652,596	-		Psyr_2282	0.67	-3.6
2,652,596	-		Psyr_2282	0.67	-2.4
2,652,596	-		Psyr_2282	0.67	-2.2
2,652,596	-		Psyr_2282	0.67	-2.0
2,652,640	+		Psyr_2282	0.69	-2.2
2,652,641	-		Psyr_2282	0.69	-2.3
2,652,796	+		Psyr_2282	0.74	+0.8
2,652,796	+		Psyr_2282	0.74	-4.0
2,653,195	+		Psyr_2282	0.86	-2.1
2,653,196	-		Psyr_2282	0.86	-3.6
2,653,196	-		Psyr_2282	0.86	-2.4
2,653,196	-		Psyr_2282	0.86	-1.8
2,653,196	-		Psyr_2282	0.86	-2.2
2,653,208	-		Psyr_2282	0.87	-2.0
2,653,208	-		Psyr_2282	0.87	-2.4
2,653,394	-				-1.6
2,653,394	-				-2.0
2,653,396	+				-1.2
2,653,396	+				-2.2
2,653,396	+				-2.8
2,653,396	+				-2.0
2,653,396	+				-2.9
2,653,397	-				-2.6
2,653,397	-				-3.6
2,653,397	-				-2.7
2,653,397	-				-0.8
2,653,948	+		Psyr_2283	0.25	-0.2
2,653,948	+		Psyr_2283	0.25	-0.2
2,653,948	+		Psyr_2283	0.25	-1.2
2,653,948	+		Psyr_2283	0.25	-2.5
2,653,948	+		Psyr_2283	0.25	-3.4
2,653,948	+		Psyr_2283	0.25	-2.4
2,653,948	+		Psyr_2283	0.25	-2.0
2,653,949	-		Psyr_2283	0.25	-3.1
2,653,949	-		Psyr_2283	0.25	-1.2
2,653,949	-		Psyr_2283	0.25	-2.2
2,653,949	-		Psyr_2283	0.25	+0.8
2,653,949	-		Psyr_2283	0.25	-1.8
2,653,949	-		Psyr_2283	0.25	-1.6
2,653,953	-		Psyr_2283	0.25	-3.0
2,654,062	+		Psyr_2283	0.35	-2.4
2,654,063	-		Psyr_2283	0.35	-2.0
2,654,128	-		Psyr_2283	0.40	-2.0
2,654,179	+		Psyr_2283	0.45	-0.8
2,654,299	+		Psyr_2283	0.55	-0.2
2,654,432	-		Psyr_2283	0.67	-3.0