Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_2099

Experiment: KB with Acriflavine 7.75 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Acriflavine 7.75 ug/ml
2,445,618	+		Psyr_2097	0.87	-1.8
2,445,747	+				+0.5
2,445,748	-				-1.0
2,445,748	-				-1.4
2,445,895	+				-2.8
2,445,896	-				+0.5
2,446,099	+		Psyr_2098	0.34	+0.5
2,446,099	+		Psyr_2098	0.34	+2.9
2,446,099	+		Psyr_2098	0.34	+0.4
2,446,100	-		Psyr_2098	0.35	+0.7
2,446,100	-		Psyr_2098	0.35	+1.0
2,446,194	+		Psyr_2098	0.47	+1.0
2,446,194	+		Psyr_2098	0.47	-1.4
2,446,194	+		Psyr_2098	0.47	-2.1
2,446,195	-		Psyr_2098	0.47	-1.3
2,446,195	-		Psyr_2098	0.47	+0.8
2,446,197	-		Psyr_2098	0.47	+0.8
2,446,251	-		Psyr_2098	0.54	+0.0
2,446,251	-		Psyr_2098	0.54	+1.0
2,446,376	-		Psyr_2098	0.71	+1.0
2,446,584	+				-1.4
2,446,584	+				+1.2
2,446,584	+				-1.3
2,446,584	+				+1.0
2,446,585	-				+1.8
2,446,585	-				+0.6
2,446,585	-				+0.5
2,446,645	+				+0.5
2,446,646	-				+0.0
2,446,646	-				-0.4
2,446,926	+		Psyr_2099	0.12	-0.2
2,446,926	+		Psyr_2099	0.12	+0.3
2,446,927	-		Psyr_2099	0.12	-1.5
2,446,927	-		Psyr_2099	0.12	+1.2
2,446,979	+		Psyr_2099	0.14	-0.7
2,447,011	+		Psyr_2099	0.15	+0.0
2,447,072	-		Psyr_2099	0.17	+1.9
2,447,114	+		Psyr_2099	0.19	-0.7
2,447,114	+		Psyr_2099	0.19	-2.0
2,447,115	-		Psyr_2099	0.19	+1.4
2,447,591	+		Psyr_2099	0.36	-0.5
2,447,591	+		Psyr_2099	0.36	-0.2
2,447,591	+		Psyr_2099	0.36	-1.6
2,447,591	+		Psyr_2099	0.36	-2.3
2,447,592	-		Psyr_2099	0.36	-0.2
2,447,592	-		Psyr_2099	0.36	-1.0
2,447,592	-		Psyr_2099	0.36	-1.0
2,447,638	-		Psyr_2099	0.38	+1.0
2,448,406	-		Psyr_2099	0.66	+1.0
2,448,492	+		Psyr_2099	0.69	-2.5
2,448,558	-		Psyr_2099	0.72	-2.1
2,448,613	+		Psyr_2099	0.74	-0.8
2,448,613	+		Psyr_2099	0.74	-0.3
2,448,613	+		Psyr_2099	0.74	+1.0
2,448,613	+		Psyr_2099	0.74	-0.4
2,448,613	+		Psyr_2099	0.74	-0.8
2,448,613	+		Psyr_2099	0.74	+0.0
2,448,614	-		Psyr_2099	0.74	-1.0
2,448,614	-		Psyr_2099	0.74	-1.5
2,448,614	-		Psyr_2099	0.74	-0.2
2,448,614	-		Psyr_2099	0.74	-0.4
2,448,614	-		Psyr_2099	0.74	-2.1
2,448,614	-		Psyr_2099	0.74	-2.0
2,448,614	-		Psyr_2099	0.74	-0.4
2,448,614	-		Psyr_2099	0.74	-3.0
2,448,614	-		Psyr_2099	0.74	+0.0
2,448,614	-		Psyr_2099	0.74	-1.0
2,448,614	-		Psyr_2099	0.74	+1.0
2,448,614	-		Psyr_2099	0.74	-0.2
2,448,615	+		Psyr_2099	0.74	+0.8
2,448,615	+		Psyr_2099	0.74	-1.3
2,448,615	+		Psyr_2099	0.74	+0.9
2,448,615	+		Psyr_2099	0.74	+0.9
2,448,615	+		Psyr_2099	0.74	+2.0
2,448,616	-		Psyr_2099	0.74	-0.5
2,448,616	-		Psyr_2099	0.74	-0.5
2,448,616	-				-1.8
2,448,616	-		Psyr_2099	0.74	+2.0
2,448,616	-		Psyr_2099	0.74	-0.8
2,448,616	-		Psyr_2099	0.74	+0.5
2,448,783	-		Psyr_2099	0.80	+0.0
2,448,829	-		Psyr_2099	0.82	-1.0
2,448,875	+		Psyr_2099	0.83	-1.3
2,448,965	+		Psyr_2099	0.87	+0.9
2,448,966	-		Psyr_2099	0.87	-0.5
2,448,966	-		Psyr_2099	0.87	+2.0
2,448,968	+		Psyr_2099	0.87	-0.4
2,448,968	+		Psyr_2099	0.87	+0.0
2,448,968	+		Psyr_2099	0.87	-0.5
2,448,968	+		Psyr_2099	0.87	-1.7
2,448,968	+		Psyr_2099	0.87	+2.0
2,448,968	+		Psyr_2099	0.87	-0.3
2,448,999	-		Psyr_2099	0.88	+0.1
2,449,125	-				-0.5
2,449,230	+				-0.5
2,449,230	+				+0.0
2,449,277	+				+0.9
2,449,278	-				-0.1
2,449,420	+				+0.0
2,449,421	-				-0.8
2,449,468	-		Psyr_2100	0.12	-0.3
2,449,496	-		Psyr_2100	0.14	+0.6
2,449,589	+		Psyr_2100	0.21	-2.8
2,449,590	-		Psyr_2100	0.21	-1.8
2,449,732	+		Psyr_2100	0.33	+0.1
2,449,733	-		Psyr_2100	0.33	+0.5
2,449,747	+		Psyr_2100	0.34	-0.2
2,449,748	-		Psyr_2100	0.34	+1.0
2,449,827	+		Psyr_2100	0.41	-0.1
2,449,827	+		Psyr_2100	0.41	+0.9
2,450,031	-		Psyr_2100	0.57	-0.1
2,450,036	+		Psyr_2100	0.58	+0.7
2,450,251	+		Psyr_2100	0.75	+0.7
2,450,251	+		Psyr_2100	0.75	-0.3