Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_1989

Experiment: KB with Acriflavine 7.75 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Acriflavine 7.75 ug/ml
2,308,152	+		Psyr_1987	0.75	+0.8
2,308,269	+		Psyr_1987	0.86	+1.1
2,308,269	+		Psyr_1987	0.86	+0.1
2,308,882	-		Psyr_1988	0.75	+0.6
2,308,905	-		Psyr_1988	0.78	-1.0
2,308,905	-		Psyr_1988	0.78	-0.6
2,308,905	-		Psyr_1988	0.78	+0.1
2,308,905	-		Psyr_1988	0.78	-2.0
2,308,999	+				-1.2
2,308,999	+				-0.6
2,309,000	-				-1.8
2,309,000	-				-0.0
2,309,000	-				-1.2
2,309,000	-				-2.7
2,309,000	-				-0.9
2,309,000	-				-0.9
2,309,000	-				-1.4
2,309,085	-				-1.1
2,309,263	+		Psyr_1989	0.17	+0.8
2,309,263	+		Psyr_1989	0.17	+3.9
2,309,719	+		Psyr_1989	0.55	+0.5
2,309,720	-		Psyr_1989	0.55	+1.9
2,309,761	+		Psyr_1989	0.58	-0.4
2,309,761	+		Psyr_1989	0.58	-0.6
2,309,762	-		Psyr_1989	0.59	-1.7
2,309,762	-		Psyr_1989	0.59	-1.4
2,309,762	-		Psyr_1989	0.59	-1.4
2,309,762	-		Psyr_1989	0.59	-1.3
2,309,762	-		Psyr_1989	0.59	-0.9
2,309,762	-		Psyr_1989	0.59	-0.4
2,309,762	-		Psyr_1989	0.59	-1.8
2,309,762	-		Psyr_1989	0.59	+1.6
2,309,864	-		Psyr_1989	0.67	-2.6
2,309,944	+		Psyr_1989	0.74	+0.1
2,310,022	+		Psyr_1989	0.80	-0.8
2,310,023	-		Psyr_1989	0.80	-1.0
2,310,088	+		Psyr_1989	0.86	-2.0
2,310,089	-		Psyr_1989	0.86	+1.7
2,310,178	+				-1.2
2,310,178	+				-0.1
2,310,178	+				-0.9
2,310,178	+				+1.7
2,310,178	+				-1.3
2,310,179	-				-0.9
2,310,179	-				+0.8
2,310,179	-				-0.4
2,310,260	-				+0.1
2,310,260	-				-0.9
2,310,310	+				-1.7
2,310,311	-				-1.7
2,310,311	-				-0.4
2,310,311	-				-0.4
2,310,311	-				-0.4
2,310,314	+				-1.2
2,310,314	+				+0.0
2,310,314	+				+0.1
2,310,314	+				-1.3
2,310,314	+				+0.1
2,310,314	+				-1.3
2,310,314	+				+0.3
2,310,314	+				-0.7
2,310,314	+				-1.6
2,310,314	+				+0.5
2,310,314	+				+1.5
2,310,314	+				+0.1
2,310,314	+				+0.9
2,310,314	+				+0.4
2,310,314	+				-0.3
2,310,314	+				+0.8
2,310,314	+				-1.4
2,310,314	+				-1.3
2,310,314	+				+0.9
2,310,314	+				+0.6
2,310,314	+				-1.2
2,310,314	+				-0.7
2,310,314	+				+0.2
2,310,315	-				+0.6
2,310,315	-				-0.4
2,310,315	-				+0.0
2,310,315	-				-1.1
2,310,315	-				-1.9
2,310,315	-				+0.1
2,310,315	-				+0.0
2,310,315	-				+0.7
2,310,315	-				+2.1
2,310,315	-				-1.7
2,310,315	-				-0.9
2,310,315	-				-1.4
2,310,315	-				+1.3
2,310,315	-				-0.9
2,310,315	-				-0.9
2,310,315	-				-0.9
2,310,315	-				+0.6
2,310,315	-				+0.8
2,310,453	-				+0.1
2,310,487	+				+0.1
2,310,487	+				-0.9
2,310,487	+				+0.5
2,310,488	-				+1.7
2,310,488	-				+0.3
2,310,488	-				+0.8
2,310,488	-				+0.1
2,310,488	-				+1.6
2,310,541	+				-0.1
2,310,541	+				-0.9
2,310,542	-				-0.4
2,310,551	+				-0.3
2,310,552	-				-0.9
2,310,564	-				-0.3
2,310,580	+				+1.4
2,310,581	-				+0.2
2,310,581	-				-0.4
2,310,581	-				-0.9
2,310,603	-				+1.1
2,310,688	-				+0.1
2,310,688	-				+0.1
2,310,792	+		Psyr_1990	0.16	-0.4
2,310,793	-		Psyr_1990	0.16	+0.7
2,310,793	-		Psyr_1990	0.16	-0.8
2,310,853	-		Psyr_1990	0.20	-1.9
2,310,928	+		Psyr_1990	0.26	-1.4
2,311,035	+		Psyr_1990	0.34	-1.0
2,311,035	+		Psyr_1990	0.34	+0.3
2,311,036	-		Psyr_1990	0.34	+0.1
2,311,036	-		Psyr_1990	0.34	+0.3
2,311,036	-		Psyr_1990	0.34	-0.9
2,311,036	-		Psyr_1990	0.34	-0.9
2,311,036	-		Psyr_1990	0.34	-1.9
2,311,037	+		Psyr_1990	0.34	+0.6
2,311,037	+		Psyr_1990	0.34	+0.3
2,311,037	+		Psyr_1990	0.34	+1.7
2,311,037	+		Psyr_1990	0.34	-0.4
2,311,038	-		Psyr_1990	0.34	-0.4
2,311,038	-		Psyr_1990	0.34	+0.5
2,311,165	-		Psyr_1990	0.44	-0.4
2,311,174	-		Psyr_1990	0.45	+0.5