Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_0947

Experiment: KB with Acriflavine 7.75 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Acriflavine 7.75 ug/ml
1,081,796	+				-0.6
1,081,797	-				-0.7
1,081,858	-		Psyr_0947	0.11	+0.9
1,081,976	-		Psyr_0947	0.18	-1.0
1,081,976	-		Psyr_0947	0.18	+1.3
1,081,976	-		Psyr_0947	0.18	-1.3
1,081,976	-		Psyr_0947	0.18	-2.6
1,081,976	-		Psyr_0947	0.18	+0.2
1,081,978	-		Psyr_0947	0.18	-2.1
1,081,978	-		Psyr_0947	0.18	-0.7
1,082,119	-		Psyr_0947	0.27	-1.0
1,082,119	-		Psyr_0947	0.27	+0.3
1,082,224	-		Psyr_0947	0.33	-2.1
1,082,368	-		Psyr_0947	0.42	-1.9
1,082,623	-		Psyr_0947	0.57	-3.0
1,082,623	-		Psyr_0947	0.57	-2.0
1,082,623	-		Psyr_0947	0.57	-3.1
1,082,623	-		Psyr_0947	0.57	-0.7
1,082,623	-		Psyr_0947	0.57	-1.5
1,082,854	-		Psyr_0947	0.71	-0.6
1,082,980	-		Psyr_0947	0.78	-3.4
1,082,980	-		Psyr_0947	0.78	+1.9
1,082,980	-		Psyr_0947	0.78	+0.3
1,082,980	-		Psyr_0947	0.78	-1.1
1,082,980	-		Psyr_0947	0.78	-1.2
1,082,980	-		Psyr_0947	0.78	-2.4
1,082,980	-		Psyr_0947	0.78	-2.3
1,082,980	-		Psyr_0947	0.78	-0.7
1,082,980	-		Psyr_0947	0.78	-2.5
1,082,980	-		Psyr_0947	0.78	-2.6
1,083,112	-		Psyr_0947	0.86	-3.1
1,083,112	-		Psyr_0947	0.86	-1.5
1,083,178	-				-2.3
1,083,178	-				-1.7
1,083,178	-				-1.9
1,083,178	-				-2.9
1,083,178	-				-3.0
1,083,178	-				-0.6
1,083,178	-				-1.3
1,083,178	-				-1.1
1,083,178	-				+0.9
1,083,178	-				-3.4
1,083,178	-				-2.3
1,083,178	-				-1.0
1,083,178	-				-2.3
1,083,178	-				-0.7
1,083,178	-				+0.0
1,083,178	-				-0.5
1,083,178	-				+0.4
1,083,178	-				-1.3
1,083,178	-				-3.2
1,083,178	-				-0.1
1,083,178	-				-2.3
1,083,178	-				-3.1
1,083,178	-				-1.8
1,083,178	-				-2.0
1,083,178	-				-3.1
1,083,178	-				-1.7
1,083,178	-				-2.5
1,083,178	-				-1.7
1,083,178	-				-1.6
1,083,268	-				-2.0
1,083,395	-				-0.6
1,083,395	-				+2.1
1,083,395	-				-0.1
1,083,395	-				-2.1
1,083,395	-				-2.1
1,083,395	-				-3.1
1,083,395	-				-0.7
1,083,395	-				-2.6
1,083,395	-				-2.1
1,083,401	-				-0.5
1,083,401	-				-0.1
1,083,401	-				-2.0
1,083,401	-				-0.1
1,083,401	-				-1.8
1,083,403	-				+0.9
1,083,403	-				-1.4
1,083,403	-				-1.3
1,083,403	-				-0.1
1,083,403	-				-0.4
1,083,403	-				-0.9
1,083,403	-				-1.7
1,083,403	-				+0.1
1,083,403	-				+0.0
1,083,403	-				-1.7
1,083,403	-				-1.7
1,083,403	-				-0.7
1,083,403	-				-0.7
1,083,403	-				-1.5
1,083,403	-				+0.6
1,083,403	-				-2.9
1,083,403	-				-1.0
1,083,403	-				-0.9
1,083,403	-				+0.6
1,083,405	-				+0.2
1,083,405	-				+0.1
1,083,405	-				+0.7
1,083,405	-				-0.6
1,083,405	-				-0.1
1,083,405	-				-0.1
1,083,405	-				-1.2
1,083,405	-				+0.5
1,083,405	-				+0.5
1,083,405	-				-1.3
1,083,405	-				+0.3
1,083,405	-				-0.1
1,083,405	-				+0.1
1,083,405	-				-0.1
1,083,405	-				-1.0
1,083,405	-				+1.1
1,083,405	-				-0.1
1,083,543	-				-2.1
1,083,556	+				+0.3
1,083,556	+				-2.3
1,083,556	+				-2.4
1,083,556	+				+0.9
1,083,556	+				+1.5
1,083,556	+				-0.7
1,083,556	+				-2.3
1,083,556	+				+0.4
1,083,556	+				+1.4
1,083,556	+				+0.4
1,083,556	+				+0.8
1,083,556	+				-0.1
1,083,556	+				-1.1
1,083,557	-				-0.6
1,083,557	-				+0.1
1,083,557	-				-3.1
1,083,557	-				-0.1
1,083,557	-				+0.3
1,083,557	-				-0.6
1,083,557	-				+0.7
1,083,557	-				-0.6
1,083,557	-				-2.7
1,083,557	-				+1.1
1,083,557	-				+0.4
1,083,557	-				-0.3