Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_0179

Experiment: KB with Acriflavine 7.75 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Acriflavine 7.75 ug/ml
193,136	+				-0.5
193,136	+				+2.4
193,136	+				-0.7
193,136	+				-0.9
193,136	+				-2.0
193,143	+				+0.0
193,144	-				+1.1
193,144	-				+1.0
193,144	-				-0.5
193,193	+				-0.6
193,193	+				+0.7
193,194	-				-0.5
193,226	+				+0.8
193,226	+				+0.1
193,226	+				-0.1
193,242	-				+1.1
193,301	+				-3.1
193,301	+				+1.1
193,301	+				-0.8
193,301	+				+0.2
193,301	+				+0.7
193,302	-				-0.7
193,302	-				-1.0
193,302	-				+0.2
193,302	-				+0.8
193,302	-				-0.8
193,554	-				+0.8
193,583	+				-0.1
193,583	+				+0.2
193,583	+				+1.6
193,583	+				-0.7
193,745	+		Psyr_0178	0.47	+0.7
193,745	+		Psyr_0178	0.47	+0.1
193,745	+		Psyr_0178	0.47	-2.0
193,746	-		Psyr_0178	0.48	+1.1
193,918	+		Psyr_0178	0.90	+1.6
193,918	+		Psyr_0178	0.90	+0.3
193,918	+		Psyr_0178	0.90	-0.3
193,919	-				+0.1
193,919	-				-0.9
193,919	-				-1.3
193,919	-				-0.8
193,919	-				+1.0
193,978	+				+1.0
193,978	+				+0.5
193,979	-				-1.0
193,991	+				-0.4
193,991	+				-0.5
193,991	+				+0.7
193,991	+				-0.4
193,992	-				+0.0
193,992	-				+0.3
193,992	-				+0.5
194,058	+				-0.7
194,059	-				+0.1
194,059	-				-0.2
194,071	+				-0.1
194,072	-				-0.0
194,075	+				-0.8
194,075	+				-0.4
194,075	+				+0.7
194,075	+				-0.4
194,075	+				-1.0
194,076	-				-0.4
194,076	-				+0.8
194,076	-				-1.0
194,076	-				-2.4
194,076	-				-0.2
194,076	-				+0.8
194,076	-				+0.8
194,076	-				+0.2
194,076	-				+0.0
194,076	-				-1.2
194,076	-				-0.2
194,258	+		Psyr_0179	0.69	-1.2
194,258	+		Psyr_0179	0.69	-0.4
194,259	-		Psyr_0179	0.70	-0.4
194,449	-		Psyr_0180	0.35	-0.0
194,518	+		Psyr_0180	0.56	+0.6
194,518	+		Psyr_0180	0.56	+0.6
194,518	+		Psyr_0180	0.56	-0.4
194,518	+		Psyr_0180	0.56	+2.1
194,519	-		Psyr_0180	0.56	+0.0
194,519	-		Psyr_0180	0.56	-0.5
194,519	-		Psyr_0180	0.56	+1.3
194,553	-		Psyr_0180	0.66	+0.7
194,600	+		Psyr_0180	0.80	+1.6
194,600	+		Psyr_0180	0.80	+0.3
194,601	-		Psyr_0180	0.80	+1.0
194,601	-		Psyr_0180	0.80	-0.5
194,601	-		Psyr_0180	0.80	+1.3
194,612	-		Psyr_0180	0.84	+1.6
194,694	+				-0.0
194,694	+				-1.5
194,694	+				+1.3
194,694	+				+0.9
194,712	+				+0.3
194,741	+				-0.6
194,741	+				+0.5
194,741	+				-2.3
194,771	-				-0.3
194,771	-				+1.6
194,786	+				+1.6
194,786	+				-1.9
194,786	+				-1.5
194,786	+				-0.0
194,786	+				+0.5
194,787	-				-0.7
194,787	-				-0.7
194,787	-				+0.3
194,787	-				-1.0
194,787	-				-0.3
194,787	-				+0.7
194,787	-				+1.0
194,787	-				+2.0