Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_0013

Experiment: KB with Acriflavine 7.75 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Acriflavine 7.75 ug/ml
14,956	-				+1.5
14,956	-				+0.4
14,994	+				+0.1
15,031	+				-0.4
15,031	+				+0.2
15,031	+				-0.4
15,032	-				-0.5
15,032	-				+0.3
15,032	-				-1.5
15,032	-				+1.7
15,032	-				+1.8
15,032	-				+2.0
15,032	-				+1.8
15,032	-				+1.2
15,032	-				+0.2
15,040	+				+1.5
15,040	+				-0.0
15,040	+				+0.2
15,040	+				+1.6
15,041	-				+0.2
15,041	-				+1.1
15,170	+		Psyr_0013	0.32	-0.7
15,171	-		Psyr_0013	0.32	+1.6
15,171	-		Psyr_0013	0.32	-2.2
15,171	-		Psyr_0013	0.32	-0.6
15,475	+		Psyr_0013	0.87	+0.2
15,475	+		Psyr_0013	0.87	+0.6
15,475	+		Psyr_0013	0.87	+0.7
15,475	+		Psyr_0013	0.87	+1.4
15,475	+		Psyr_0013	0.87	-0.4
15,475	+		Psyr_0013	0.87	+0.7
15,475	+		Psyr_0013	0.87	+0.5
15,476	-		Psyr_0013	0.87	+0.5
15,476	-		Psyr_0013	0.87	-0.3
15,591	-				-1.0
15,975	+		Psyr_0014	0.44	-1.3
15,975	+		Psyr_0014	0.44	-2.5
16,302	-		Psyr_0014	0.81	-0.7
16,302	-		Psyr_0014	0.81	-2.3
16,302	-		Psyr_0014	0.81	+0.3
16,335	+		Psyr_0014	0.84	-2.3
16,335	-		Psyr_0014	0.84	+0.1
16,336	-		Psyr_0014	0.85	-0.5
16,336	-		Psyr_0014	0.85	-0.7
16,336	-		Psyr_0014	0.85	-2.3
16,336	-		Psyr_0014	0.85	-0.7
16,336	-		Psyr_0014	0.85	-1.3
16,336	-		Psyr_0014	0.85	-2.9
16,389	+				-2.5
16,389	+				-1.4
16,413	+				-2.5
16,413	+				-1.3
16,413	+				-2.6
16,413	+				-2.5
16,414	-				-0.3
16,414	-				-2.7
16,467	+				+0.7
16,467	+				+0.0
16,470	+				-0.6
16,471	-				-1.0
16,471	-				+0.2
16,471	-				+0.2