Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS30585

Experiment: Temperature shift 10_to_25; with MOPS

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Temperature shift 10_to_25; with MOPS
2,155,272	+				-2.3
2,155,272	+				+1.2
2,155,272	+				+2.4
2,155,272	+				+0.2
2,155,272	+				-2.6
2,155,272	+				-3.2
2,155,273	-				+2.3
2,155,311	+				+1.2
2,155,322	-				-2.0
2,155,329	+				+0.9
2,155,329	+				-2.2
2,155,329	+				-3.4
2,155,330	-				+1.8
2,155,330	-				-0.4
2,155,330	-				-3.2
2,155,330	-				+0.3
2,155,335	-				+1.7
2,155,409	+				-0.2
2,155,409	+				+0.6
2,155,410	-				-1.2
2,155,410	-				-1.0
2,155,410	-				-2.7
2,155,415	+				-0.6
2,155,415	+				+1.9
2,155,416	-				-0.1
2,155,416	-				-3.4
2,155,416	-				+2.0
2,155,416	-				-1.5
2,155,416	-				+0.6
2,155,474	+		PFLU_RS09780	0.14	-2.6
2,155,475	-		PFLU_RS09780	0.15	+1.4
2,155,528	+		PFLU_RS09780	0.20	+1.0
2,155,528	+		PFLU_RS09780	0.20	+1.4
2,155,528	+		PFLU_RS09780	0.20	+0.4
2,155,528	+		PFLU_RS09780	0.20	+1.1
2,155,528	+		PFLU_RS09780	0.20	-1.5
2,155,528	+		PFLU_RS09780	0.20	-3.7
2,155,528	+		PFLU_RS09780	0.20	-1.8
2,155,528	+		PFLU_RS09780	0.20	+1.0
2,155,529	-		PFLU_RS09780	0.20	-0.6
2,155,529	-		PFLU_RS09780	0.20	+1.0
2,155,529	-		PFLU_RS09780	0.20	-1.0
2,155,529	-		PFLU_RS09780	0.20	-2.0
2,155,529	-		PFLU_RS09780	0.20	-1.0
2,155,529	-		PFLU_RS09780	0.20	+0.4
2,155,529	-		PFLU_RS09780	0.20	-1.6
2,155,529	-		PFLU_RS09780	0.20	+0.8
2,155,529	-		PFLU_RS09780	0.20	-1.6
2,155,529	-		PFLU_RS09780	0.20	+0.8
2,155,529	-		PFLU_RS09780	0.20	+0.4
2,155,529	-		PFLU_RS09780	0.20	+0.1
2,155,529	-		PFLU_RS09780	0.20	+0.0
2,155,529	-		PFLU_RS09780	0.20	-0.0
2,155,530	+		PFLU_RS09780	0.21	+2.0
2,155,530	+		PFLU_RS09780	0.21	-0.7
2,155,530	+		PFLU_RS09780	0.21	+0.0
2,155,530	+		PFLU_RS09780	0.21	-3.0
2,155,530	+		PFLU_RS09780	0.21	-3.3
2,155,530	+		PFLU_RS09780	0.21	-1.0
2,155,530	+		PFLU_RS09780	0.21	-1.0
2,155,530	+		PFLU_RS09780	0.21	-2.2
2,155,530	+		PFLU_RS09780	0.21	-0.2
2,155,530	+		PFLU_RS09780	0.21	+0.2
2,155,530	+		PFLU_RS09780	0.21	+1.7
2,155,530	+		PFLU_RS09780	0.21	-2.7
2,155,531	-		PFLU_RS09780	0.21	-0.6
2,155,531	-		PFLU_RS09780	0.21	+1.9
2,155,531	-		PFLU_RS09780	0.21	+0.2
2,155,531	-		PFLU_RS09780	0.21	+1.4
2,155,531	-		PFLU_RS09780	0.21	-0.3
2,155,531	-		PFLU_RS09780	0.21	-1.4
2,155,539	+		PFLU_RS09780	0.21	+2.1
2,155,539	+		PFLU_RS09780	0.21	-0.2
2,155,550	+		PFLU_RS09780	0.23	-1.2
2,155,550	+		PFLU_RS09780	0.23	+1.7
2,155,550	+		PFLU_RS09780	0.23	+0.7
2,155,551	-		PFLU_RS09780	0.23	+1.6
2,155,551	-		PFLU_RS09780	0.23	-1.0
2,155,551	-		PFLU_RS09780	0.23	-0.2
2,155,551	-		PFLU_RS09780	0.23	-0.1
2,155,585	+		PFLU_RS09780	0.26	-2.6
2,155,625	-		PFLU_RS09780	0.31	-0.4
2,155,655	+		PFLU_RS09780	0.34	-2.6
2,155,664	+		PFLU_RS09780	0.35	-0.2
2,155,664	+		PFLU_RS09780	0.35	+1.2
2,155,664	+		PFLU_RS09780	0.35	+0.4
2,155,665	-		PFLU_RS09780	0.35	+1.9
2,155,665	-		PFLU_RS09780	0.35	-1.0
2,155,665	-		PFLU_RS09780	0.35	+2.3
2,155,665	-		PFLU_RS09780	0.35	-3.0
2,155,699	+		PFLU_RS09780	0.39	-0.5
2,155,705	+		PFLU_RS09780	0.40	+1.2
2,155,732	+		PFLU_RS09780	0.42	-2.8
2,155,732	+		PFLU_RS09780	0.42	-1.8
2,155,732	+		PFLU_RS09780	0.42	-0.3
2,155,732	+		PFLU_RS09780	0.42	-1.0
2,155,732	+		PFLU_RS09780	0.42	-2.0
2,155,732	+		PFLU_RS09780	0.42	-2.7
2,155,732	+		PFLU_RS09780	0.42	-0.6
2,155,732	+		PFLU_RS09780	0.42	+1.2
2,155,732	+		PFLU_RS09780	0.42	-1.8
2,155,732	+		PFLU_RS09780	0.42	-2.2
2,155,732	+		PFLU_RS09780	0.42	-1.6
2,155,732	+		PFLU_RS09780	0.42	-1.2
2,155,732	+		PFLU_RS09780	0.42	+0.5
2,155,732	+		PFLU_RS09780	0.42	+2.1
2,155,732	+		PFLU_RS09780	0.42	+2.9
2,155,732	+		PFLU_RS09780	0.42	-2.0
2,155,732	+		PFLU_RS09780	0.42	-2.5
2,155,732	+		PFLU_RS09780	0.42	-2.3
2,155,732	+		PFLU_RS09780	0.42	-2.9
2,155,732	+		PFLU_RS09780	0.42	+0.2
2,155,732	+		PFLU_RS09780	0.42	-0.0
2,155,732	+		PFLU_RS09780	0.42	-2.3
2,155,732	+		PFLU_RS09780	0.42	+0.9
2,155,732	+		PFLU_RS09780	0.42	-0.7
2,155,732	+		PFLU_RS09780	0.42	-0.7
2,155,732	+		PFLU_RS09780	0.42	-0.0
2,155,732	+		PFLU_RS09780	0.42	+0.8
2,155,732	+		PFLU_RS09780	0.42	+0.2
2,155,733	-		PFLU_RS09780	0.43	-0.4
2,155,733	-		PFLU_RS09780	0.43	-1.2
2,155,733	-		PFLU_RS09780	0.43	-0.5
2,155,733	-		PFLU_RS09780	0.43	+0.8
2,155,733	-		PFLU_RS09780	0.43	-0.5
2,155,733	-		PFLU_RS09780	0.43	-2.2
2,155,733	-		PFLU_RS09780	0.43	-2.6
2,155,733	-		PFLU_RS09780	0.43	+2.5
2,155,733	-		PFLU_RS09780	0.43	-2.2
2,155,733	-		PFLU_RS09780	0.43	+1.4
2,155,733	-		PFLU_RS09780	0.43	-1.5
2,155,733	-		PFLU_RS09780	0.43	-2.3
2,155,733	-		PFLU_RS09780	0.43	+0.4
2,155,733	-		PFLU_RS09780	0.43	-1.2
2,155,733	-		PFLU_RS09780	0.43	+0.6
2,155,733	-		PFLU_RS09780	0.43	+0.5
2,155,733	-		PFLU_RS09780	0.43	-2.3
2,155,733	-		PFLU_RS09780	0.43	-1.5
2,155,733	-		PFLU_RS09780	0.43	-2.3
2,155,736	+		PFLU_RS09780	0.43	-0.1
2,155,810	+		PFLU_RS09780	0.51	-3.0
2,155,810	+		PFLU_RS09780	0.51	-0.1
2,155,811	-		PFLU_RS09780	0.51	-0.2
2,155,811	-		PFLU_RS09780	0.51	-0.3
2,155,811	-		PFLU_RS09780	0.51	+3.2
2,155,811	-		PFLU_RS09780	0.51	-0.4
2,155,811	-		PFLU_RS09780	0.51	-2.9
2,155,811	-		PFLU_RS09780	0.51	+1.5
2,155,817	+		PFLU_RS09780	0.52	-0.1
2,155,818	-		PFLU_RS09780	0.52	-1.8
2,155,848	+		PFLU_RS09780	0.55	-2.3
2,155,867	+		PFLU_RS09780	0.57	-2.2
2,155,875	-		PFLU_RS09780	0.58	+2.4
2,155,875	-		PFLU_RS09780	0.58	-1.0
2,155,926	+		PFLU_RS09780	0.64	+0.6
2,155,939	+		PFLU_RS09780	0.65	-1.0
2,155,939	+		PFLU_RS09780	0.65	+1.2
2,155,939	+		PFLU_RS09780	0.65	-0.1
2,155,939	+		PFLU_RS09780	0.65	-3.0
2,155,940	-		PFLU_RS09780	0.65	+0.6
2,155,940	-		PFLU_RS09780	0.65	-2.0
2,155,940	-		PFLU_RS09780	0.65	-1.2
2,155,940	-		PFLU_RS09780	0.65	-3.2
2,155,940	-		PFLU_RS09780	0.65	+0.3
2,155,940	-		PFLU_RS09780	0.65	+0.4
2,155,940	-		PFLU_RS09780	0.65	-0.6
2,156,005	+		PFLU_RS09780	0.72	-2.5
2,156,006	-		PFLU_RS09780	0.72	+2.7
2,156,029	+		PFLU_RS09780	0.75	+1.9
2,156,029	+		PFLU_RS09780	0.75	-1.2
2,156,029	+		PFLU_RS09780	0.75	-1.5
2,156,029	+		PFLU_RS09780	0.75	-1.8
2,156,029	+		PFLU_RS09780	0.75	+0.3
2,156,030	-		PFLU_RS09780	0.75	+1.5
2,156,030	-		PFLU_RS09780	0.75	+0.8
2,156,030	-		PFLU_RS09780	0.75	+1.8
2,156,030	-		PFLU_RS09780	0.75	+1.3
2,156,030	-		PFLU_RS09780	0.75	+1.4
2,156,030	-		PFLU_RS09780	0.75	+1.4
2,156,030	-		PFLU_RS09780	0.75	-1.2
2,156,030	-		PFLU_RS09780	0.75	-0.5
2,156,030	-		PFLU_RS09780	0.75	+1.1
2,156,049	+		PFLU_RS09780	0.77	-0.3
2,156,049	+		PFLU_RS09780	0.77	-1.2
2,156,049	+		PFLU_RS09780	0.77	-2.7
2,156,050	-		PFLU_RS09780	0.77	-2.0
2,156,072	-		PFLU_RS09780	0.79	-1.5
2,156,101	+		PFLU_RS09780	0.83	-2.1
2,156,101	+		PFLU_RS09780	0.83	-2.8
2,156,101	+		PFLU_RS09780	0.83	+0.9
2,156,101	+		PFLU_RS09780	0.83	+2.5
2,156,101	+		PFLU_RS09780	0.83	+0.9
2,156,102	-		PFLU_RS09780	0.83	-2.0
2,156,132	+		PFLU_RS09780	0.86	+1.0
2,156,133	-		PFLU_RS09780	0.86	-1.1
2,156,174	+				-0.6
2,156,175	-				+0.9
2,156,194	+				-2.1
2,156,194	+				+3.2
2,156,194	+				-2.2
2,156,194	+				-1.2
2,156,195	-				+0.8
2,156,195	-				-1.2
2,156,195	-				+1.5
2,156,195	-				+1.4
2,156,195	-				-2.2
2,156,195	-				+0.4
2,156,195	-				+0.1
2,156,239	+				-1.8
2,156,239	+				+3.2
2,156,239	+				-1.0
2,156,240	-				+2.0
2,156,304	+				-1.0
2,156,304	+				-1.2
2,156,304	+				-1.2
2,156,304	+				+0.2
2,156,304	+				+0.4
2,156,304	+				-2.1
2,156,304	+				+1.4
2,156,304	+				-1.0
2,156,304	+				+0.0
2,156,304	+				+0.5
2,156,304	+				+1.4
2,156,304	+				-0.3
2,156,304	+				-1.8
2,156,304	+				-1.6
2,156,305	-				-1.0
2,156,305	-				+0.9
2,156,305	-				-0.6
2,156,305	-				-2.0
2,156,305	-				+1.3
2,156,305	-				+2.3
2,156,305	-				+1.0
2,156,348	+				-1.1
2,156,348	+				+2.6
2,156,348	+				+0.7
2,156,348	+				-0.8
2,156,348	+				-1.8
2,156,349	-				+1.4
2,156,349	-				+1.5
2,156,349	-				+2.2
2,156,361	+				-3.2
2,156,361	+				-1.6
2,156,361	+				+1.2
2,156,361	+				-2.6
2,156,361	+				+0.2
2,156,361	+				-2.6
2,156,361	+				-0.6
2,156,361	+				+0.6
2,156,362	-				-1.6
2,156,362	-				+0.4
2,156,362	-				-1.8
2,156,362	-				+0.7
2,156,362	-				+0.4
2,156,362	-				+0.5
2,156,362	-				+0.4
2,156,362	-				-1.0
2,156,362	-				-0.6
2,156,362	-				+0.8
2,156,378	-		PFLU_RS30585	0.11	-1.6
2,156,417	+		PFLU_RS30585	0.14	-0.4
2,156,417	+		PFLU_RS30585	0.14	-0.5
2,156,417	+		PFLU_RS30585	0.14	+2.2
2,156,417	+		PFLU_RS30585	0.14	+0.2
2,156,417	+		PFLU_RS30585	0.14	-1.6
2,156,418	-		PFLU_RS30585	0.14	-3.0
2,156,418	-		PFLU_RS30585	0.14	-1.2
2,156,448	+		PFLU_RS30585	0.17	+0.2
2,156,455	-		PFLU_RS30585	0.17	+1.8
2,156,455	-		PFLU_RS30585	0.17	-0.6
2,156,474	+		PFLU_RS30585	0.19	-0.3
2,156,474	+		PFLU_RS30585	0.19	-1.0
2,156,474	+		PFLU_RS30585	0.19	-2.3
2,156,474	+		PFLU_RS30585	0.19	+0.5
2,156,474	+		PFLU_RS30585	0.19	-1.2
2,156,474	+		PFLU_RS30585	0.19	+0.1
2,156,474	+		PFLU_RS30585	0.19	+2.1
2,156,475	-		PFLU_RS30585	0.19	+0.8
2,156,475	-		PFLU_RS30585	0.19	-0.2
2,156,475	-		PFLU_RS30585	0.19	-3.0
2,156,475	-		PFLU_RS30585	0.19	+1.6
2,156,475	-		PFLU_RS30585	0.19	-2.1
2,156,475	-		PFLU_RS30585	0.19	-0.6
2,156,475	-		PFLU_RS30585	0.19	+1.1
2,156,475	-		PFLU_RS30585	0.19	+2.5
2,156,475	-		PFLU_RS30585	0.19	+0.5
2,156,508	+		PFLU_RS30585	0.22	+1.4
2,156,565	+		PFLU_RS30585	0.26	-2.6
2,156,565	+		PFLU_RS30585	0.26	-1.0
2,156,566	-		PFLU_RS30585	0.27	+0.5
2,156,566	-		PFLU_RS30585	0.27	-0.2
2,156,566	-		PFLU_RS30585	0.27	-3.2
2,156,566	-		PFLU_RS30585	0.27	+0.9
2,156,571	+		PFLU_RS30585	0.27	-3.6
2,156,571	+		PFLU_RS30585	0.27	-1.0
2,156,571	+		PFLU_RS30585	0.27	+1.7
2,156,572	-		PFLU_RS30585	0.27	-1.5
2,156,572	-		PFLU_RS30585	0.27	+0.4
2,156,572	-		PFLU_RS30585	0.27	+0.3
2,156,572	-		PFLU_RS30585	0.27	-0.1
2,156,572	-		PFLU_RS30585	0.27	-2.6
2,156,615	+		PFLU_RS30585	0.31	+0.2
2,156,615	+		PFLU_RS30585	0.31	+1.8
2,156,616	-		PFLU_RS30585	0.31	+1.4
2,156,616	-		PFLU_RS30585	0.31	-1.0
2,156,616	-		PFLU_RS30585	0.31	+0.3
2,156,616	-		PFLU_RS30585	0.31	-1.2
2,156,635	+		PFLU_RS30585	0.32	+0.4
2,156,635	+		PFLU_RS30585	0.32	+0.4
2,156,635	+		PFLU_RS30585	0.32	-2.5
2,156,635	+		PFLU_RS30585	0.32	-0.4
2,156,635	+		PFLU_RS30585	0.32	+1.6
2,156,635	+		PFLU_RS30585	0.32	-3.0
2,156,636	-		PFLU_RS30585	0.32	+0.1
2,156,636	-		PFLU_RS30585	0.32	+0.9
2,156,637	+		PFLU_RS30585	0.32	-2.1
2,156,637	+		PFLU_RS30585	0.32	-0.6
2,156,637	+		PFLU_RS30585	0.32	+0.2
2,156,637	+		PFLU_RS30585	0.32	-2.6
2,156,638	-		PFLU_RS30585	0.33	-2.3
2,156,638	-		PFLU_RS30585	0.33	-3.1
2,156,638	-		PFLU_RS30585	0.33	+1.6
2,156,638	-		PFLU_RS30585	0.33	-1.0
2,156,721	+		PFLU_RS30585	0.40	+0.1
2,156,721	+		PFLU_RS30585	0.40	-1.3
2,156,721	+		PFLU_RS30585	0.40	+1.9
2,156,721	+		PFLU_RS30585	0.40	-0.7
2,156,721	+		PFLU_RS30585	0.40	+0.1
2,156,721	+		PFLU_RS30585	0.40	+1.8
2,156,721	+		PFLU_RS30585	0.40	+0.4
2,156,721	+		PFLU_RS30585	0.40	+1.4
2,156,721	+		PFLU_RS30585	0.40	+0.1
2,156,721	+		PFLU_RS30585	0.40	+0.0
2,156,722	-		PFLU_RS30585	0.40	-2.9
2,156,722	-		PFLU_RS30585	0.40	-0.9
2,156,722	-		PFLU_RS30585	0.40	-0.2
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