Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS24225

Experiment: R2A with Paraquat dichloride 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Paraquat dichloride 0.003 mg/ml
5,898,987	+		CA265_RS24215	0.36	+0.3
5,899,012	-		CA265_RS24215	0.39	+1.2
5,899,015	-		CA265_RS24215	0.40	+0.5
5,899,028	+		CA265_RS24215	0.42	+0.4
5,899,058	-		CA265_RS24215	0.46	-1.7
5,899,152	+		CA265_RS24215	0.60	-0.4
5,899,200	+		CA265_RS24215	0.67	+1.1
5,899,217	+		CA265_RS24215	0.70	+1.6
5,899,217	+		CA265_RS24215	0.70	+1.2
5,899,283	-		CA265_RS24215	0.80	-1.2
5,899,283	-		CA265_RS24215	0.80	+0.3
5,899,284	+		CA265_RS24215	0.80	-1.0
5,899,285	-		CA265_RS24215	0.80	-1.1
5,899,338	-		CA265_RS24215	0.88	+0.5
5,899,340	-		CA265_RS24215	0.88	-0.1
5,899,340	-		CA265_RS24215	0.88	+0.8
5,899,354	-				-1.1
5,899,372	-				-0.6
5,899,427	+				-0.5
5,899,437	+				-0.0
5,899,437	+				-0.8
5,899,485	-				-1.6
5,899,506	-				+0.2
5,899,537	+		CA265_RS24220	0.11	+1.0
5,899,538	-		CA265_RS24220	0.11	+2.2
5,899,591	+		CA265_RS24220	0.23	-0.2
5,899,592	-		CA265_RS24220	0.23	+0.4
5,899,706	-		CA265_RS24220	0.48	-1.1
5,899,709	-		CA265_RS24220	0.49	-0.7
5,899,714	-		CA265_RS24220	0.50	-1.2
5,899,767	+		CA265_RS24220	0.62	+0.5
5,899,767	+		CA265_RS24220	0.62	+0.0
5,899,768	-		CA265_RS24220	0.62	-0.4
5,899,768	-		CA265_RS24220	0.62	+1.2
5,899,768	-		CA265_RS24220	0.62	+0.9
5,899,863	+		CA265_RS24220	0.83	-0.1
5,899,864	-		CA265_RS24220	0.84	-0.1
5,899,963	+				+0.6
5,901,065	-				+0.9
5,901,085	+				-1.4
5,901,110	+				-0.3
5,901,111	-				+1.5
5,901,234	+		CA265_RS24230	0.21	+1.2
5,901,260	-		CA265_RS24230	0.26	+1.1
5,901,265	-		CA265_RS24230	0.27	+0.6
5,901,331	-		CA265_RS24230	0.39	+0.1
5,901,362	+		CA265_RS24230	0.45	+0.8
5,901,367	-		CA265_RS24230	0.46	-1.9
5,901,382	-		CA265_RS24230	0.49	+0.5
5,901,406	-		CA265_RS24230	0.53	+0.4
5,901,406	-		CA265_RS24230	0.53	+0.4
5,901,406	-		CA265_RS24230	0.53	+0.5
5,901,406	-		CA265_RS24230	0.53	+0.5
5,901,406	-		CA265_RS24230	0.53	+0.1
5,901,406	-		CA265_RS24230	0.53	-0.9
5,901,406	-		CA265_RS24230	0.53	+1.9
5,901,415	-		CA265_RS24230	0.55	-0.0
5,901,433	-		CA265_RS24230	0.58	+0.6
5,901,474	-		CA265_RS24230	0.66	+0.3
5,901,487	+		CA265_RS24230	0.68	+0.6
5,901,487	+		CA265_RS24230	0.68	+0.9
5,901,488	-		CA265_RS24230	0.69	-0.6
5,901,488	-		CA265_RS24230	0.69	+2.9
5,901,517	+		CA265_RS24230	0.74	-1.5
5,901,520	-		CA265_RS24230	0.75	+0.5
5,901,520	-		CA265_RS24230	0.75	+0.2
5,901,540	+		CA265_RS24230	0.78	+0.9
5,901,541	-		CA265_RS24230	0.79	+0.4
5,901,549	+		CA265_RS24230	0.80	+1.2
5,901,549	+		CA265_RS24230	0.80	+1.1
5,901,657	+				+3.1
5,901,774	-				+0.2
5,901,828	+				-0.1
5,901,830	+				+1.2
5,901,849	+				+0.8
5,901,865	-				+0.4
5,901,903	-				+0.7
5,901,915	-				+1.0
5,901,915	-				+0.4
5,901,959	+				+1.6
5,901,960	-				+1.5
5,901,960	-				+0.6
5,901,967	+				+1.8
5,901,968	-				+1.7
5,901,972	+				+1.2
5,901,982	+				+0.8