Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS21100

Experiment: R2A with Paraquat dichloride 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Paraquat dichloride 0.003 mg/ml
5,199,334	+		CA265_RS21095	0.64	+0.1
5,199,407	+		CA265_RS21095	0.67	+0.5
5,199,407	+		CA265_RS21095	0.67	-2.2
5,199,408	-		CA265_RS21095	0.67	-1.7
5,199,474	+		CA265_RS21095	0.70	-1.1
5,199,475	-		CA265_RS21095	0.70	+1.3
5,199,512	+				-0.4
5,199,529	-		CA265_RS21095	0.73	+0.6
5,199,549	+		CA265_RS21095	0.73	+0.7
5,199,550	-		CA265_RS21095	0.73	+0.1
5,199,550	-		CA265_RS21095	0.73	+0.3
5,199,651	+		CA265_RS21095	0.78	-0.4
5,199,651	+		CA265_RS21095	0.78	-0.8
5,199,722	+		CA265_RS21095	0.81	-0.4
5,199,723	-		CA265_RS21095	0.81	-0.1
5,199,739	+		CA265_RS21095	0.82	+2.4
5,199,739	+		CA265_RS21095	0.82	-1.8
5,199,803	+		CA265_RS21095	0.84	+0.2
5,199,913	+		CA265_RS21095	0.89	-2.7
5,199,945	-				-0.2
5,200,093	-				+0.4
5,200,127	-				-0.2
5,200,167	-				-0.3
5,200,210	+				-0.2
5,200,284	+				-0.8
5,200,285	-				-1.4
5,200,357	-		CA265_RS21100	0.16	-0.9
5,200,453	-		CA265_RS21100	0.41	-0.1
5,200,464	-		CA265_RS21100	0.44	-0.8
5,200,509	+		CA265_RS21100	0.56	+0.3
5,200,509	+		CA265_RS21100	0.56	-1.1
5,200,510	-		CA265_RS21100	0.56	-0.2
5,200,510	-		CA265_RS21100	0.56	-0.2
5,200,533	-		CA265_RS21100	0.62	-1.2
5,200,548	+		CA265_RS21100	0.66	+0.0
5,200,577	-		CA265_RS21100	0.73	-0.1
5,200,591	+		CA265_RS21100	0.77	-3.2
5,200,777	+				-0.2
5,200,847	-		CA265_RS21105	0.16	-0.6
5,200,948	-		CA265_RS21105	0.31	+0.2
5,200,948	-		CA265_RS21105	0.31	-1.2
5,201,077	+		CA265_RS21105	0.50	-0.8
5,201,077	+		CA265_RS21105	0.50	-0.7
5,201,078	-		CA265_RS21105	0.50	-0.2
5,201,125	+		CA265_RS21105	0.58	+0.1
5,201,126	-		CA265_RS21105	0.58	+0.8
5,201,133	-		CA265_RS21105	0.59	-0.3
5,201,133	-		CA265_RS21105	0.59	+0.2
5,201,156	+		CA265_RS21105	0.62	-1.9
5,201,157	-		CA265_RS21105	0.62	-1.1
5,201,157	-		CA265_RS21105	0.62	-2.6
5,201,245	+		CA265_RS21105	0.76	-0.6
5,201,292	+		CA265_RS21105	0.83	-0.9
5,201,312	-		CA265_RS21105	0.86	+0.4
5,201,312	-		CA265_RS21105	0.86	-0.2
5,201,354	-				-1.1
5,201,381	+				-2.0
5,201,384	+				-1.4
5,201,392	-				-0.4