Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS21055

Experiment: R2A with Paraquat dichloride 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Paraquat dichloride 0.003 mg/ml
5,185,233	-		CA265_RS21050	0.25	+0.5
5,185,233	-		CA265_RS21050	0.25	-1.9
5,185,281	+		CA265_RS21050	0.29	-2.2
5,185,281	+		CA265_RS21050	0.29	-0.9
5,185,311	-		CA265_RS21050	0.32	+0.8
5,185,315	+		CA265_RS21050	0.32	+1.4
5,185,377	-		CA265_RS21050	0.38	+0.0
5,185,381	+		CA265_RS21050	0.38	-1.5
5,185,396	+		CA265_RS21050	0.40	-0.7
5,185,574	-		CA265_RS21050	0.56	+0.7
5,185,574	-		CA265_RS21050	0.56	-0.5
5,185,646	-		CA265_RS21050	0.62	+2.4
5,185,650	-		CA265_RS21050	0.63	-0.1
5,185,782	-		CA265_RS21050	0.75	-1.7
5,185,785	-		CA265_RS21050	0.75	-1.3
5,185,819	+		CA265_RS21050	0.78	-0.3
5,185,871	+		CA265_RS21050	0.83	-0.3
5,185,872	-		CA265_RS21050	0.83	-0.6
5,185,908	+		CA265_RS21050	0.86	-0.6
5,185,909	-		CA265_RS21050	0.86	-0.2
5,186,009	+				-1.4
5,186,009	+				+0.0
5,186,010	-				+2.0
5,186,041	-				-0.7
5,186,041	-				-0.6
5,186,050	-				-0.6
5,186,092	+				-0.1
5,186,098	+				-0.6
5,186,117	-				+0.8
5,186,117	-				-0.6
5,186,137	+				-0.5
5,186,155	-				+0.7
5,186,201	+				+0.4
5,186,290	+		CA265_RS21055	0.10	-1.6
5,186,290	+		CA265_RS21055	0.10	-0.4
5,186,291	-		CA265_RS21055	0.10	+0.8
5,186,292	+		CA265_RS21055	0.11	-2.4
5,186,445	-		CA265_RS21055	0.22	+0.6
5,186,463	-		CA265_RS21055	0.23	+0.6
5,186,463	-		CA265_RS21055	0.23	+1.7
5,186,504	+		CA265_RS21055	0.27	-1.7
5,186,505	-		CA265_RS21055	0.27	+0.6
5,186,508	-		CA265_RS21055	0.27	+0.8
5,186,564	+		CA265_RS21055	0.31	-0.4
5,186,564	+		CA265_RS21055	0.31	-0.1
5,186,565	-		CA265_RS21055	0.31	+2.2
5,186,569	-		CA265_RS21055	0.32	+1.6
5,186,632	+		CA265_RS21055	0.36	-1.4
5,186,633	-		CA265_RS21055	0.36	+1.0
5,186,765	+		CA265_RS21055	0.46	-1.4
5,186,863	+		CA265_RS21055	0.54	-0.4
5,186,880	+		CA265_RS21055	0.55	-0.3
5,186,918	+		CA265_RS21055	0.58	+0.1
5,186,919	-		CA265_RS21055	0.58	+1.0
5,186,944	+		CA265_RS21055	0.60	+0.5
5,186,960	-		CA265_RS21055	0.61	+0.7
5,186,969	-		CA265_RS21055	0.62	+1.1
5,187,013	+		CA265_RS21055	0.65	+0.5
5,187,014	-		CA265_RS21055	0.65	+0.1
5,187,015	+		CA265_RS21055	0.65	-0.3
5,187,015	+		CA265_RS21055	0.65	+0.1
5,187,020	-		CA265_RS21055	0.66	+1.1
5,187,087	-		CA265_RS21055	0.71	+0.9
5,187,091	-		CA265_RS21055	0.71	-1.4
5,187,091	-		CA265_RS21055	0.71	-0.3
5,187,121	-		CA265_RS21055	0.73	-0.9
5,187,237	-		CA265_RS21055	0.82	+0.8
5,187,295	-		CA265_RS21055	0.87	+0.3
5,187,311	-		CA265_RS21055	0.88	+0.5
5,187,349	+				+0.2
5,187,418	+				-2.2
5,187,419	-				+1.0
5,187,419	-				+0.4
5,187,472	+				-0.5
5,187,503	+				-1.3
5,187,504	-				+1.1
5,187,507	+				+1.0
5,187,535	-				-0.3
5,187,594	+				-1.7
5,187,619	-				-0.0
5,187,688	-				-0.2
5,187,723	-				-0.5
5,187,776	+		CA265_RS21060	0.23	+6.9
5,187,800	-		CA265_RS21060	0.29	+6.3
5,187,902	+		CA265_RS21060	0.57	+6.2
5,187,905	-		CA265_RS21060	0.58	+6.6
5,187,911	-		CA265_RS21060	0.59	+5.5
5,187,956	-		CA265_RS21060	0.72	+6.6
5,188,051	-				+8.1
5,188,053	-				+5.6
5,188,055	-				+5.3
5,188,055	-				+4.1
5,188,055	-				+4.6
5,188,055	-				+5.2
5,188,068	-				+1.8
5,188,219	+		CA265_RS21065	0.50	-0.0
5,188,252	+		CA265_RS21065	0.61	-1.8
5,188,275	+		CA265_RS21065	0.69	+0.8
5,188,309	+		CA265_RS21065	0.80	+0.1
5,188,361	+				+0.1
5,188,390	+				+1.2
5,188,397	+				+0.6
5,188,397	+				+0.6